RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 UXS1Q8NBZ7 420 aa18.79■□□□□ 0.6
PMS1-220ENST00000618056 PINX1Q96BK5 328 aaKnown RBP18.79■□□□□ 0.6
PMS1-220ENST00000618056 NUDT15Q9NV35 164 aa18.79■□□□□ 0.6
PMS1-220ENST00000618056 MRPL27Q9P0M9 148 aaKnown RBP18.79■□□□□ 0.6
PMS1-220ENST00000618056 ALG5Q9Y673 324 aa18.79■□□□□ 0.6
PMS1-220ENST00000618056 ZNF785A8K8V0 405 aa18.78■□□□□ 0.6
PMS1-220ENST00000618056 C11orf87Q6NUJ2 197 aa18.78■□□□□ 0.6
PMS1-220ENST00000618056 LYZL2Q7Z4W2 148 aa18.78■□□□□ 0.6
PMS1-220ENST00000618056 GTSCR1Q86UQ5 136 aa18.78■□□□□ 0.6
PMS1-220ENST00000618056 DUXBA0A1W2PPF3 345 aa18.77■□□□□ 0.6
PMS1-220ENST00000618056 NUPL2O15504 423 aaKnown RBP18.77■□□□□ 0.6
PMS1-220ENST00000618056 FRMD6-AS1P0C7T7 363 aa18.77■□□□□ 0.6
PMS1-220ENST00000618056 CCR6P51684 374 aa18.77■□□□□ 0.6
PMS1-220ENST00000618056 DAZ1Q9NQZ3 744 aaKnown RBP18.77■□□□□ 0.6
PMS1-220ENST00000618056 MLXQ9UH92 298 aa18.77■□□□□ 0.6
PMS1-220ENST00000618056 IGHV4-30-4P0DP06 118 aa18.77■□□□□ 0.59
PMS1-220ENST00000618056 HTR2BP41595 481 aa18.77■□□□□ 0.59
PMS1-220ENST00000618056 RELQ04864 619 aaPredicted RBP18.77■□□□□ 0.59
PMS1-220ENST00000618056 LRTM2Q8N967 370 aa18.77■□□□□ 0.59
PMS1-220ENST00000618056 ZNF414Q96IQ9 312 aa18.77■□□□□ 0.59
PMS1-220ENST00000618056 TRAV6A0A075B6T7 132 aa18.76■□□□□ 0.59
PMS1-220ENST00000618056 CCNKO75909 580 aa18.76■□□□□ 0.59
PMS1-220ENST00000618056 IGHV3-48P01763 117 aa18.76■□□□□ 0.59
PMS1-220ENST00000618056 CD300CQ08708 224 aa18.76■□□□□ 0.59
PMS1-220ENST00000618056 SMCO1Q147U7 214 aa18.76■□□□□ 0.59
PMS1-220ENST00000618056 C20orf85Q9H1P6 137 aa18.76■□□□□ 0.59
PMS1-220ENST00000618056 HEYLQ9NQ87 328 aaPredicted RBP18.76■□□□□ 0.59
PMS1-220ENST00000618056 K7EMT4 169 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 GNG7O60262 68 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 H2AFB2P0C5Z0 115 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 VAMP1P23763 118 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 NPBWR1P48145 328 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 UBE2MP61081 183 aaKnown RBP18.75■□□□□ 0.59
PMS1-220ENST00000618056 TMEM61Q8N0U2 210 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 ASCL2Q99929 193 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 C19orf73Q9NVV2 129 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 HSPB7Q9UBY9 170 aa18.75■□□□□ 0.59
PMS1-220ENST00000618056 HUWE1Q7Z6Z7 4374 aaKnown RBP18.75■□□□□ 0.59
PMS1-220ENST00000618056 A0A1B0GU03 582 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 C15orf62A8K5M9 175 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 CEBPZOSA8MTT3 80 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 NDUFB6O95139 128 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 SFT2D2O95562 160 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 PPP1R1AQ13522 171 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 ANKRD55Q3KP44 614 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 C2orf83Q53S99 150 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 BTNL8Q6UX41 500 aa18.74■□□□□ 0.59
PMS1-220ENST00000618056 FNDC4Q9H6D8 234 aaPredicted RBP18.74■□□□□ 0.59
PMS1-220ENST00000618056 TNFRSF9Q07011 255 aa18.73■□□□□ 0.59
PMS1-220ENST00000618056 SBSPONQ8IVN8 264 aa18.73■□□□□ 0.59
PMS1-220ENST00000618056 WDR89Q96FK6 387 aaPredicted RBP18.73■□□□□ 0.59
PMS1-220ENST00000618056 C20orf24Q9BUV8 137 aa18.73■□□□□ 0.59
PMS1-220ENST00000618056 TENM3Q9P273 2699 aa18.73■□□□□ 0.59
PMS1-220ENST00000618056 TRAV25A0A0B4J276 109 aa18.72■□□□□ 0.59
PMS1-220ENST00000618056 EIF2B2P49770 351 aaKnown RBP18.72■□□□□ 0.59
PMS1-220ENST00000618056 GUCA2BQ16661 112 aa18.72■□□□□ 0.59
PMS1-220ENST00000618056 SLC24A4Q8NFF2 622 aa18.72■□□□□ 0.59
PMS1-220ENST00000618056 OR10C1Q96KK4 312 aa18.72■□□□□ 0.59
PMS1-220ENST00000618056 HIPK2Q9H2X6 1198 aa18.72■□□□□ 0.59
PMS1-220ENST00000618056 OPRK1P41145 380 aa18.71■□□□□ 0.59
PMS1-220ENST00000618056 CD81P60033 236 aa18.71■□□□□ 0.59
PMS1-220ENST00000618056 C7orf66A4D0T2 115 aa18.71■□□□□ 0.59
PMS1-220ENST00000618056 NXPH3O95157 252 aa18.71■□□□□ 0.59
PMS1-220ENST00000618056 SLC25A6P12236 298 aa18.71■□□□□ 0.59
PMS1-220ENST00000618056 OR4X1Q8NH49 305 aa18.71■□□□□ 0.59
PMS1-220ENST00000618056 RNASEH2CQ8TDP1 164 aaKnown RBP18.71■□□□□ 0.59
PMS1-220ENST00000618056 TMED3Q9Y3Q3 217 aa18.71■□□□□ 0.59
PMS1-220ENST00000618056 U3KQK5 164 aa18.71■□□□□ 0.59
PMS1-220ENST00000618056 IGHV3OR16-8A0A075B7F1 116 aa18.7■□□□□ 0.58
PMS1-220ENST00000618056 PITX3O75364 302 aa18.7■□□□□ 0.58
PMS1-220ENST00000618056 TMEM50AO95807 157 aa18.7■□□□□ 0.58
PMS1-220ENST00000618056 TMEM170AQ8WVE7 144 aa18.7■□□□□ 0.58
PMS1-220ENST00000618056 MRPL36Q9P0J6 103 aaKnown RBP18.7■□□□□ 0.58
PMS1-220ENST00000618056 SELENOKQ9Y6D0 94 aa18.7■□□□□ 0.58
PMS1-220ENST00000618056 RPS10-NUDT3A0A1W2PQS6 291 aa18.69■□□□□ 0.58
PMS1-220ENST00000618056 PRAF2O60831 178 aa18.69■□□□□ 0.58
PMS1-220ENST00000618056 CLN5O75503 358 aa18.69■□□□□ 0.58
PMS1-220ENST00000618056 CD7P09564 240 aa18.69■□□□□ 0.58
PMS1-220ENST00000618056 RRAS2P62070 204 aaPredicted RBP18.69■□□□□ 0.58
PMS1-220ENST00000618056 MLANAQ16655 118 aa18.69■□□□□ 0.58
PMS1-220ENST00000618056 RBPMS2Q6ZRY4 209 aaKnown RBP18.69■□□□□ 0.58
PMS1-220ENST00000618056 NOXA1Q86UR1 476 aa18.69■□□□□ 0.58
PMS1-220ENST00000618056 OR1S1Q8NH92 325 aa18.69■□□□□ 0.58
PMS1-220ENST00000618056 U3KQ87 197 aa18.69■□□□□ 0.58
PMS1-220ENST00000618056 YIF1AO95070 293 aa18.68■□□□□ 0.58
PMS1-220ENST00000618056 NPY1RP25929 384 aa18.68■□□□□ 0.58
PMS1-220ENST00000618056 ZNF600Q6ZNG1 722 aa18.68■□□□□ 0.58
PMS1-220ENST00000618056 DTD1Q8TEA8 209 aa18.68■□□□□ 0.58
PMS1-220ENST00000618056 RBKSQ9H477 322 aa18.68■□□□□ 0.58
PMS1-220ENST00000618056 NBEAL2Q6ZNJ1 2754 aa18.67■□□□□ 0.58
PMS1-220ENST00000618056 C9orf170A2RU37 121 aa18.67■□□□□ 0.58
PMS1-220ENST00000618056 ZNF207O43670 478 aaKnown RBP18.67■□□□□ 0.58
PMS1-220ENST00000618056 SCAF4O95104 1147 aaKnown RBP18.67■□□□□ 0.58
PMS1-220ENST00000618056 SLC16A13Q7RTY0 426 aa18.67■□□□□ 0.58
PMS1-220ENST00000618056 TUBA4BQ9H853 241 aa18.67■□□□□ 0.58
PMS1-220ENST00000618056 SMPXQ9UHP9 88 aa18.67■□□□□ 0.58
PMS1-220ENST00000618056 FLVCR2Q9UPI3 526 aa18.67■□□□□ 0.58
PMS1-220ENST00000618056 FAM90A26D6RGX4 464 aa18.66■□□□□ 0.58
PMS1-220ENST00000618056 TSPAN4O14817 238 aa18.66■□□□□ 0.58
PMS1-220ENST00000618056 SLC25A4P12235 298 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms