RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 AZU1P20160 251 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 ZNF93P35789 620 aaPredicted RBP6.76□□□□□ -1.33
GPC6-202ENST00000617456 SNCAP37840 140 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 TAS2R43P59537 309 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 DGCR2P98153 550 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 DOC2BQ14184 412 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 C17orf58Q2M2W7 97 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 ABCA11PQ4W5N1 156 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 ACSM3Q53FZ2 586 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 GFI1BQ5VTD9 330 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 LINC00311Q8N616 119 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 TPRX1Q8N7U7 411 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 STPG4Q8N801 248 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 RNF152Q8N8N0 203 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 OR5B3Q8NH48 314 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 OR52E5Q8NH55 327 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 ABHD5Q8WTS1 349 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 GALMQ96C23 342 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 KIRREL1Q96J84 757 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 GPER1Q99527 375 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 AMBNQ9NP70 447 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.76□□□□□ -1.33
GPC6-202ENST00000617456 TMEM242Q9NWH2 141 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 BET1LQ9NYM9 111 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 CKLFQ9UBR5 152 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
GPC6-202ENST00000617456 BIRC6Q9NR09 4857 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 TRBV5-5A0A0J9YX44 114 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A10PA6NDY2 464 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A7PA6NKC0 464 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A23PA8MXZ1 464 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 M0QXV9 152 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 GNG7O60262 68 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 TYMSP04818 313 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 TRGC1P0CF51 173 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 IGFBP3P17936 291 aaPredicted RBP6.75□□□□□ -1.33
GPC6-202ENST00000617456 FSTP19883 344 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 SRSF3P84103 164 aaKnown RBP6.75□□□□□ -1.33
GPC6-202ENST00000617456 EBI3Q14213 229 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 Q499Y3 187 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 FAM78BQ5VT40 261 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 DMKNQ6E0U4 476 aaPredicted RBP6.75□□□□□ -1.33
GPC6-202ENST00000617456 C18orf65Q6ZTR6 163 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 OSR2Q8N2R0 312 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 FER1L6-AS1Q8NA97 138 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 ZNF485Q8NCK3 441 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 OR51A2Q8NGJ7 313 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 TNFAIP8L1Q8WVP5 186 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 GPR82Q96P67 336 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 SPACA5Q96QH8 159 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 MCRIP2Q9BUT9 160 aaKnown RBP6.75□□□□□ -1.33
GPC6-202ENST00000617456 ZNF286AQ9HBT8 521 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 TXNL4BQ9NX01 149 aaKnown RBP6.75□□□□□ -1.33
GPC6-202ENST00000617456 FKBP11Q9NYL4 201 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 CALYQ9NYX4 217 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 IDI2-AS1Q9NZ38 188 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 TNFSF18Q9UNG2 199 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 LAMTOR2Q9Y2Q5 125 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 UFC1Q9Y3C8 167 aa6.75□□□□□ -1.33
GPC6-202ENST00000617456 TRBV24-1A0A075B6N3 115 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 A0A0B4J2A0 478 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 C15orf65H3BRN8 121 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 RAB29O14966 203 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 XRCC3O43542 346 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 YPEL1O60688 119 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 HBZP02008 142 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 SOX2P48431 317 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 THBS3P49746 956 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 RND2P52198 227 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 MFAP4P55083 255 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 RBM11P57052 281 aaKnown RBP6.74□□□□□ -1.33
GPC6-202ENST00000617456 SRPXP78539 464 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 ZNF816Q0VGE8 651 aaPredicted RBP6.74□□□□□ -1.33
GPC6-202ENST00000617456 KLF9Q13886 244 aaPredicted RBP6.74□□□□□ -1.33
GPC6-202ENST00000617456 LTC4SQ16873 150 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 TMEM183BQ1AE95 376 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 TMEM128Q5BJH2 165 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 CST9LP1Q5W188 147 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 BTNL8Q6UX41 500 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 RBPMS2Q6ZRY4 209 aaKnown RBP6.74□□□□□ -1.33
GPC6-202ENST00000617456 C8orf86Q6ZUL3 223 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 ZNF329Q86UD4 541 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 GAPTQ8N292 157 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 KCNG3Q8TAE7 436 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 MUC7Q8TAX7 377 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 VN1R17PQ8TDU5 208 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 RPEQ96AT9 228 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 DUX3Q96PT4 197 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 CIB3Q96Q77 187 aaPredicted RBP6.74□□□□□ -1.33
GPC6-202ENST00000617456 YPEL2Q96QA6 119 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 PRR25Q96S07 402 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 SPATA25Q9BR10 227 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 SLC25A33Q9BSK2 321 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 QTRT1Q9BXR0 403 aaKnown RBP6.74□□□□□ -1.33
GPC6-202ENST00000617456 Q9N2K0 584 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 PARP11Q9NR21 331 aa6.74□□□□□ -1.33
GPC6-202ENST00000617456 SHPKQ9UHJ6 478 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms