RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	RAMP1	O60894	148 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	ZNF250	P15622	560 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	IGFBP3	P17936	291 aa	Predicted RBP	6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	LTBR	P36941	435 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	ATP5L2	Q7Z4Y8	100 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	PUSL1	Q8N0Z8	303 aa	Known RBP	6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	CCL20	P78556	96 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	CST9L	Q9H4G1	147 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	GGTLC3	B5MD39	225 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	CBLN1	P23435	193 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	FAM169B	Q8N8A8	192 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	CHCHD1	Q96BP2	118 aa	Known RBP	6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	FBLN5	Q9UBX5	448 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	LOC285556	D6RIA3	1793 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	ANKRD12	Q6UB98	2062 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	FAM89B	Q8N5H3	189 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	OSTC	Q9NRP0	149 aa		6.12	□□□□□ -1.43
PCDH15-231	ENST00000617271	GLMP	Q8WWB7	406 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	PLEKHB2	Q96CS7	222 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	RTBDN	Q9BSG5	229 aa	Predicted RBP	6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	CROCC	Q5TZA2	2017 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	PGPEP1L	A6NFU8	196 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	SRSF8	Q9BRL6	282 aa	Known RBP	6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	PKIG	Q9Y2B9	76 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	RALGAPA2	Q2PPJ7	1873 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	TAF1L	Q8IZX4	1826 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	IGHV1-8	P0DP01	117 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	DDT	P30046	118 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	RMI2	Q96E14	147 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	IMMP2L	Q96T52	175 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	DMRT1	Q9Y5R6	373 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	TMEM238	C9JI98	176 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	TOMM40	O96008	361 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	LINC00158	P58513	81 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	ATXN8	Q156A1	80 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	OR10W1	Q8NGF6	305 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	LINC00477	Q96M19	166 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	TMEM178B	H3BS89	294 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	TMEM155	Q4W5P6	130 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	LCN12	Q6JVE5	192 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	WFDC6	Q9BQY6	131 aa		6.11	□□□□□ -1.43
PCDH15-231	ENST00000617271	COL11A1	P12107	1806 aa	Predicted RBP	6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	IGKC	P01834	107 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	ATP5G3	P48201	142 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	EFNB1	P98172	346 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	FBLN7	Q53RD9	439 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	C1QL2	Q7Z5L3	287 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	SMCHD1	A6NHR9	2005 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	IGKV1D-43	A0A0B4J1Z2	117 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	IGHV1-3	A0A0C4DH29	117 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271		A0A1B0GWB2	263 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	HIGD1C	A8MV81	97 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	SRP19	P09132	144 aa	Known RBP	6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	H2BFS	P57053	126 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	MSRB2	Q9Y3D2	182 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	TRAV8-4	A0A0B4J246	113 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	PRR32	B1ATL7	298 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	FOXA3	P55318	350 aa	Predicted RBP	6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	LAGE3	Q14657	143 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	SS18	Q15532	418 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	CARHSP1	Q9Y2V2	147 aa	Known RBP	6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	GOLGA4	Q13439	2230 aa	Known RBP	6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	DOCK5	Q9H7D0	1870 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	TGFBR3L	H3BV60	316 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	C1QC	P02747	245 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	DUT	P33316	252 aa	Known RBP	6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	GNG5	P63218	68 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	TRGV9	Q99603	122 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	JPT2	Q9H910	190 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	PSME4	Q14997	1843 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	PATJ	Q8NI35	1801 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	TNFSF13	O75888	250 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	ERCC8	Q13216	396 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	NHLRC3	Q5JS37	347 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271	C5orf30	Q96GV9	206 aa		6.1	□□□□□ -1.43
PCDH15-231	ENST00000617271		A0A1B0GTI1	187 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	MPZ	P25189	248 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	KLHL30-AS1	Q8NEE0	82 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	MS4A6A	Q9H2W1	248 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	DEPP	Q9NTK1	212 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271		A0A0G2JMZ2	1700 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	LRRC37A2	A6NM11	1700 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	IGKV3D-20	A0A0C4DH25	116 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271		J3QLI3	93 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	SLC17A3	O00476	420 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	RPUSD1	Q9UJJ7	312 aa	Known RBP	6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271		M0R2P5	195 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	SRRM5	B3KS81	715 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	ERVH48-1	M5A8F1	160 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	SUPT4H1	P63272	117 aa	Known RBP	6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	HEPN1	Q6WQI6	88 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	TEX43	Q6ZNM6	134 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	SLC25A48	Q6ZT89	311 aa	Known RBP	6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	ATOH7	Q8N100	152 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	VWCE	Q96DN2	955 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	BRWD3	Q6RI45	1802 aa		6.09	□□□□□ -1.43
PCDH15-231	ENST00000617271	TRGV1	A0A0A0MS02	117 aa		6.09	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms