RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 CEBPGP53567 150 aa7.96□□□□□ -1.14
AL353770.3-201ENST00000616253 FXYD3Q14802 87 aa7.96□□□□□ -1.14
AL353770.3-201ENST00000616253 CYB561D1Q8N8Q1 229 aa7.96□□□□□ -1.14
AL353770.3-201ENST00000616253 NPIPB3Q92617 1050 aa7.96□□□□□ -1.14
AL353770.3-201ENST00000616253 SRSF8Q9BRL6 282 aaKnown RBP7.96□□□□□ -1.14
AL353770.3-201ENST00000616253 MRPL36Q9P0J6 103 aaKnown RBP7.96□□□□□ -1.14
AL353770.3-201ENST00000616253 DOPEY2Q9Y3R5 2298 aa7.96□□□□□ -1.14
AL353770.3-201ENST00000616253 ABCA1O95477 2261 aa7.96□□□□□ -1.14
AL353770.3-201ENST00000616253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 IGHV1-69DA0A0B4J2H0 117 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 IGHV1-69P01742 117 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 GATA2P23769 480 aaPredicted RBP7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 BRS3P32247 399 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 RND2P52198 227 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 SOHLH1Q5JUK2 328 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 ETFRF1Q6IPR1 90 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 FAM103A1Q9BTL3 118 aaKnown RBP7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 DMRT1Q9Y5R6 373 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 ABCA12Q86UK0 2595 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 UNC79Q9P2D8 2635 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 CSMD1Q96PZ7 3565 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 IGHV3-21A0A0B4J1V1 117 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 CORTO00230 105 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 CRYGCP07315 174 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 RHOBP62745 196 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 NDPQ00604 133 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 PMS2P11Q13670 270 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 SPATA31B1PQ5VZV4 182 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 RBMS3Q6XE24 437 aaKnown RBP7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 BRD3OSQ6XYD6 125 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 CYP2G1PQ6ZSU1 146 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 CLRN3Q8NCR9 226 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 GATAD1Q8WUU5 269 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 ARPC1AQ92747 370 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 SLC25A33Q9BSK2 321 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 MANBALQ9NQG1 85 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 VAX2Q9UIW0 290 aa7.95□□□□□ -1.14
AL353770.3-201ENST00000616253 IGKV1D-37A0A075B6S9 117 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 FAM74A7A6NL05 159 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 B4DSR2 109 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 NUPL2O15504 423 aaKnown RBP7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 ARL14EPLP0DKL9 152 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 PSMB3P49720 205 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 CX3CL1P78423 397 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 FAM74A3Q4VXF1 159 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 SLC35E3Q7Z769 313 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 Q8N9W7 124 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 THAP8Q8NA92 274 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 WNT10AQ9GZT5 417 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 SEPSECSQ9HD40 501 aaKnown RBP7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 HIF1ANQ9NWT6 349 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 CELSR1Q9NYQ6 3014 aa7.94□□□□□ -1.14
AL353770.3-201ENST00000616253 A0A096LNT2 108 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 DNASE2O00115 360 aaPredicted RBP7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 MT-CO2P00403 227 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 STAG3L2P0CL84 134 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 STAG3L3P0CL85 134 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 IGHV4-38-2P0DP08 117 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 MEF2BQ02080 365 aaPredicted RBP7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 TMEM249Q2WGJ8 235 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 AKIRIN2Q53H80 203 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 ZNF562Q6V9R5 426 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 C22orf15Q8WYQ4 148 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 C7orf69Q9H7B7 122 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 C1RLQ9NZP8 487 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 TCRBV4S1A1TA0A5B7 111 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 PAGE4O60829 102 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 CXorf1O96002 111 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 ATF4P18848 351 aaPredicted RBP7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 TAGLN2P37802 199 aaKnown RBP7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 CD81P60033 236 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 ZNF90Q03938 601 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 AWAT1Q58HT5 328 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 FAM78BQ5VT40 261 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 TMEM88Q6PEY1 159 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 SPNS3Q6ZMD2 512 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 BEX4Q9NWD9 120 aaPredicted RBP7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 FUT9Q9Y231 359 aa7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 PUS1Q9Y606 427 aaKnown RBP eCLIP7.93□□□□□ -1.14
AL353770.3-201ENST00000616253 IGHV7-81A0A0B4J1V7 117 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 TRAV20A0A0B4J274 112 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 A0A0U1RQK1 487 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 I3L2K1 104 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 M0R036 132 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 UBE2G2P60604 165 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 DEFB113Q30KQ7 82 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 ASPHD1Q5U4P2 390 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 FAM90A2PQ658T7 463 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 MIR17HGQ75NE6 70 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 CBLN2Q8IUK8 224 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 TMEM116Q8NCL8 245 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 C20orf24Q9BUV8 137 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 ZFHX3Q15911 3703 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 NBPF19A0A087WUL8 3843 aa7.92□□□□□ -1.14
AL353770.3-201ENST00000616253 NPIPB5A8MRT5 1133 aa7.91□□□□□ -1.14
AL353770.3-201ENST00000616253 H3BQ15 152 aa7.91□□□□□ -1.14
AL353770.3-201ENST00000616253 HLA-DRB1P01911 266 aa7.91□□□□□ -1.14
AL353770.3-201ENST00000616253 OR5G3P0C626 314 aa7.91□□□□□ -1.14
AL353770.3-201ENST00000616253 GCHFRP30047 84 aa7.91□□□□□ -1.14
AL353770.3-201ENST00000616253 KRTAP21-3Q3LHN1 58 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms