RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 SCGB1C2P0DMR2 95 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 PAX9P55771 341 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 ARPC1AQ92747 370 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 VKORC1Q9BQB6 163 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 IGKV1D-17A0A075B6S4 117 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 H3BTX0 84 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 Q1RN00 199 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 LYPD6BQ8NI32 183 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 DMRTA2Q96SC8 542 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 METRNQ9UJH8 293 aa7.33□□□□□ -1.24
PCDH15-229ENST00000616114 TCF21O43680 179 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 IGKV1D-33P01593 117 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 IGKV1-33P01594 117 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 AMBPP02760 352 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 KRTAP27-1Q3LI81 207 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 SLC25A48Q6ZT89 311 aaKnown RBP7.32□□□□□ -1.24
PCDH15-229ENST00000616114 C5orf24Q7Z6I8 188 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 RNASE7Q9H1E1 156 aaKnown RBP7.32□□□□□ -1.24
PCDH15-229ENST00000616114 NRN1Q9NPD7 142 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 RFNGQ9Y644 331 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 SNRNP200O75643 2136 aaKnown RBP7.32□□□□□ -1.24
PCDH15-229ENST00000616114 HIGD1CA8MV81 97 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 C8orf46Q8TAG6 207 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 TSKUQ8WUA8 353 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 SGK494Q96LW2 274 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 GAFA1Q96PS6 74 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 HS3ST6Q96QI5 342 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 MPDZO75970 2070 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 SOD3P08294 240 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 SCGB1D4Q6XE38 83 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 NEU1Q99519 415 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 TCF23Q7RTU1 214 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 SYT8Q8NBV8 401 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 TRGV9Q99603 122 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 K7ERU9 68 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 NMUP48645 174 aa7.32□□□□□ -1.24
PCDH15-229ENST00000616114 TMEM178BH3BS89 294 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 NTF4P34130 210 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 CTAG1AP78358 180 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 FBXL7Q9UJT9 491 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 KIAA1549LQ6ZVL6 1849 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 TRIOBPQ9H2D6 2365 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 ZNF324O75467 553 aaPredicted RBP7.31□□□□□ -1.24
PCDH15-229ENST00000616114 WNT2P09544 360 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 TMEM136Q6ZRR5 245 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 PRELID3AQ96N28 172 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 PTPRZ1P23471 2315 aaPredicted RBP7.31□□□□□ -1.24
PCDH15-229ENST00000616114 FAM106AQ4KMX7 169 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 EBLN2Q6P2I7 272 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 PRDM13Q9H4Q3 707 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 PHF3Q92576 2039 aaKnown RBP7.31□□□□□ -1.24
PCDH15-229ENST00000616114 PRSS8Q16651 343 aa7.31□□□□□ -1.24
PCDH15-229ENST00000616114 CHCHD1Q96BP2 118 aaKnown RBP7.31□□□□□ -1.24
PCDH15-229ENST00000616114 DOCK9Q9BZ29 2069 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 A6NJY4 79 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 GATA4P43694 442 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 TM4SF20Q53R12 229 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 Q6ZS92 163 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 ERASQ7Z444 233 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 SH2D7A6NKC9 451 aaPredicted RBP7.3□□□□□ -1.24
PCDH15-229ENST00000616114 H0YJW9 148 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 TMEM50AO95807 157 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 PF4V1P10720 104 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 TEX29Q8N6K0 151 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 TRAV3A0A0B4J244 114 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 PPP1R17O96001 155 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 SEPSECSQ9HD40 501 aaKnown RBP7.3□□□□□ -1.24
PCDH15-229ENST00000616114 RP1L1Q8IWN7 2480 aaPredicted RBP7.3□□□□□ -1.24
PCDH15-229ENST00000616114 PGPEP1LA6NFU8 196 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 OR4C46A6NHA9 309 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 J3KRW8 73 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 IGHV1-8P0DP01 117 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 PYYP10082 97 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 FOXA3P55318 350 aaPredicted RBP7.3□□□□□ -1.24
PCDH15-229ENST00000616114 COTL1Q14019 142 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 Q8TCH9 128 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 RNF125Q96EQ8 232 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 RPL13AP40429 203 aaKnown RBP7.3□□□□□ -1.24
PCDH15-229ENST00000616114 SMAGPQ0VAQ4 97 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 SRSF9Q13242 221 aaKnown RBP eCLIP7.3□□□□□ -1.24
PCDH15-229ENST00000616114 GFI1BQ5VTD9 330 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 SPATA31B1PQ5VZV4 182 aa7.3□□□□□ -1.24
PCDH15-229ENST00000616114 MRPL52Q86TS9 123 aaKnown RBP7.3□□□□□ -1.24
PCDH15-229ENST00000616114 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.29□□□□□ -1.24
PCDH15-229ENST00000616114 GAGE10A6NGK3 116 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 OOSP1A8MZH6 123 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 APOHP02749 345 aaPredicted RBP7.29□□□□□ -1.24
PCDH15-229ENST00000616114 BEND2Q8NDZ0 799 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 SLC50A1Q9BRV3 221 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 PHLDA3Q9Y5J5 127 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 KIF26AQ9ULI4 1882 aaPredicted RBP7.29□□□□□ -1.24
PCDH15-229ENST00000616114 CFHR2P36980 270 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 OR10W1Q8NGF6 305 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 ZNF414Q96IQ9 312 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 SRSF8Q9BRL6 282 aaKnown RBP7.29□□□□□ -1.24
PCDH15-229ENST00000616114 NUDT3O95989 172 aa7.29□□□□□ -1.24
PCDH15-229ENST00000616114 IGKV1-39P01597 117 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms