RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 PINX1Q96BK5 328 aaKnown RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 RAB3CQ96E17 227 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 GNPNAT1Q96EK6 184 aaPredicted RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 CLUHP3Q96NS8 147 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 METTL26Q96S19 204 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 SAV1Q9H4B6 383 aaPredicted RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 SEPSECSQ9HD40 501 aaKnown RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 CCL28Q9NRJ3 127 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 MRPL36Q9P0J6 103 aaKnown RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 DIMT1Q9UNQ2 313 aaKnown RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 AP4S1Q9Y587 144 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 OR51B2Q9Y5P1 312 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 A0A075B6Q4 140 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 TMEM272A0A1B0GTI8 110 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 EBAG9O00559 213 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 SLC17A2O00624 439 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 EI24O14681 340 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 SIVA1O15304 175 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 DENRO43583 198 aaKnown RBP4.63□□□□□ -1.67
MUC1-227ENST00000615517 HOXA1P49639 335 aaPredicted RBP4.63□□□□□ -1.67
MUC1-227ENST00000615517 RASSF2P50749 326 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 ZNF79Q15937 498 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 C2orf76Q3KRA6 126 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 Q6ZSA8 131 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 OR4B1Q8NGF8 309 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 OR4C16Q8NGL9 310 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 CENPNQ96H22 339 aaPredicted RBP4.63□□□□□ -1.67
MUC1-227ENST00000615517 NRN1Q9NPD7 142 aa4.63□□□□□ -1.67
MUC1-227ENST00000615517 F6UB75 175 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 GAS8-AS1O95177 125 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 C1QBP02746 253 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 HIST1H1DP16402 221 aaKnown RBP4.62□□□□□ -1.67
MUC1-227ENST00000615517 MYL12AP19105 171 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 HOXA5P20719 270 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 NPBWR1P48145 328 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 HNRNPA3P51991 378 aaKnown RBP4.62□□□□□ -1.67
MUC1-227ENST00000615517 AP2S1P53680 142 aaPredicted RBP4.62□□□□□ -1.67
MUC1-227ENST00000615517 PSG9Q00887 426 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 OR5I1Q13606 314 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 FOXI2Q6ZQN5 318 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 NFE4Q86UQ8 179 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 PQLC1Q8N2U9 271 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 OR10R2Q8NGX6 335 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 FAM3DQ96BQ1 224 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 PLEKHA2Q9HB19 425 aa4.62□□□□□ -1.67
MUC1-227ENST00000615517 LRCOL1A6NCL2 159 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 MARCH11A6NNE9 402 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 ZNF701M0R085 212 aaPredicted RBP4.61□□□□□ -1.67
MUC1-227ENST00000615517 CRXO43186 299 aaPredicted RBP4.61□□□□□ -1.67
MUC1-227ENST00000615517 GHRHP01286 108 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 CTXN2P0C2S0 81 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 PTHLHP12272 177 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 M6PRP20645 277 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 TALDO1P37837 337 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 EIF2B2P49770 351 aaKnown RBP4.61□□□□□ -1.67
MUC1-227ENST00000615517 RORCP51449 518 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 RAB11BQ15907 218 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 MLANAQ16655 118 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 HSD17B12Q53GQ0 312 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 FAM78BQ5VT40 261 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 AMTNQ6UX39 209 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 OR51H1Q8NH63 302 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
MUC1-227ENST00000615517 SECTM1Q8WVN6 248 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 TMEM80Q96HE8 168 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 IGF2BP2-AS1Q96M15 143 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 TMEM56Q96MV1 263 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 TMEM208Q9BTX3 173 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 CENPOQ9BU64 300 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 WDR12Q9GZL7 423 aaKnown RBP4.61□□□□□ -1.67
MUC1-227ENST00000615517 PLGRKTQ9HBL7 147 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 COMMD9Q9P000 198 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 AK6Q9Y3D8 172 aaKnown RBP4.61□□□□□ -1.67
MUC1-227ENST00000615517 ORC6Q9Y5N6 252 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 MUC2Q02817 5179 aa4.61□□□□□ -1.67
MUC1-227ENST00000615517 LPAP08519 4548 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 A0A096LPF7 62 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 LOC100130705A0A1B0GUX0 176 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 A8MTW9 85 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 SOCS3O14543 225 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 CLN5O75503 358 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 IGKV1-17P01599 117 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 HNRNPCP07910 306 aaKnown RBP eCLIP4.6□□□□□ -1.67
MUC1-227ENST00000615517 UCHL1P09936 223 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 FCGR1AP12314 374 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 ELK1P19419 428 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 DTYMKP23919 212 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 TSPOP30536 169 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 G6PCP35575 357 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 PAX9P55771 341 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 MSMO1Q15800 293 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 C21orf62-AS1Q17RA5 79 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 TIGITQ495A1 244 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 CNIH2Q6PI25 160 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 SIGLEC15Q6ZMC9 328 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 ZNF818PQ6ZRF7 136 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 CADM3Q8N126 398 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 OR13F1Q8NGS4 319 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 LGALS14Q8TCE9 139 aa4.6□□□□□ -1.67
MUC1-227ENST00000615517 TMEM230Q96A57 120 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms