RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SH3BGRL3Q9H299 93 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 S4R3C0 116 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 FNDC10F2Z333 226 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 NDUFB8O95169 186 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 RND2P52198 227 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 RHOGP84095 191 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 ACSM6Q6P461 480 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 ALKAL2Q6UX46 152 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 Q8N2B8 174 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 NPIPB3Q92617 1050 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 GINS3Q9BRX5 216 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
SREK1-216ENST00000612404 ZNF580Q9UK33 172 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 WDR83OSQ9Y284 106 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 TSPAN9O75954 239 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 ATP6V0CP27449 155 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 TEPPQ6URK8 271 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 Q6ZSV7 163 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 SCARB1Q8WTV0 552 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 TMED6Q8WW62 240 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 RSG1Q9BU20 258 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 ARV1Q9H2C2 271 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 SLC25A32Q9H2D1 315 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 RFNGQ9Y644 331 aa13.71□□□□□ -0.21
SREK1-216ENST00000612404 TRGV3P03979 118 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 PF4V1P10720 104 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 RPL15P61313 204 aaKnown RBP13.7□□□□□ -0.22
SREK1-216ENST00000612404 TMEM144Q7Z5S9 345 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 ZNF680Q8NEM1 530 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 PARD6GQ9BYG4 376 aaPredicted RBP13.7□□□□□ -0.22
SREK1-216ENST00000612404 TRBV9A0A0B4J1U6 114 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 MFSD2BA6NFX1 497 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 CFHR3Q02985 330 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 C15orf32Q32M92 178 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 ZNF709Q8N972 641 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
SREK1-216ENST00000612404 GNPNAT1Q96EK6 184 aaPredicted RBP13.7□□□□□ -0.22
SREK1-216ENST00000612404 IFNA7P01567 189 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 MDKP21741 143 aaPredicted RBP13.69□□□□□ -0.22
SREK1-216ENST00000612404 TPPP2P59282 170 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 NPCDR1Q9BY65 106 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 JMJD1CQ15652 2540 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 IGKV1OR2-108A0A075B7D4 117 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 PSMB11A5LHX3 300 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 MPDU1O75352 247 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 IGHV3-23P01764 117 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 SLC35B1P78383 322 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 EIF5AL1Q6IS14 154 aaKnown RBP13.69□□□□□ -0.22
SREK1-216ENST00000612404 C10orf99Q6UWK7 81 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 OR2G3Q8NGZ4 309 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 PHYHIPLQ96FC7 376 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 MGST2Q99735 147 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 SERTAD4Q9NUC0 356 aa13.69□□□□□ -0.22
SREK1-216ENST00000612404 LSM4Q9Y4Z0 139 aaKnown RBP13.69□□□□□ -0.22
SREK1-216ENST00000612404 ZFP92A6NM28 416 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 H3BUA1 57 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 SPP1P10451 314 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 CAMLGP49069 296 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 SRSF2Q01130 221 aaKnown RBP13.68□□□□□ -0.22
SREK1-216ENST00000612404 RAB31Q13636 194 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 KLK9Q2XQG4 91 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 LCNL1Q6ZST4 164 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 CENPVQ7Z7K6 275 aaPredicted RBP13.68□□□□□ -0.22
SREK1-216ENST00000612404 KLK15Q9H2R5 256 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 C21orf62Q9NYP8 219 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 KLK9Q9UKQ9 250 aa13.68□□□□□ -0.22
SREK1-216ENST00000612404 C17orf112F2Z3M2 114 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 AGPAT2O15120 278 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 IGHG4P01861 327 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 MFAP4P55083 255 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 FAM74A1Q5RGS3 127 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 OR4X1Q8NH49 305 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 FAM223BA6NKX1 122 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 OR10J1P30954 320 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 Q56UQ5 140 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 FAM223AQ8IWN6 122 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 VN1R17PQ8TDU5 208 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 CXorf58Q96LI9 332 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 UBQLN2Q9UHD9 624 aa13.67□□□□□ -0.22
SREK1-216ENST00000612404 SEC11BP0C7V7 166 aa13.66□□□□□ -0.22
SREK1-216ENST00000612404 NPBWR1P48145 328 aa13.66□□□□□ -0.22
SREK1-216ENST00000612404 TMEM182Q6ZP80 229 aaPredicted RBP13.66□□□□□ -0.22
SREK1-216ENST00000612404 GGTLC1Q9BX51 225 aa13.66□□□□□ -0.22
SREK1-216ENST00000612404 RAB9AP51151 201 aa13.66□□□□□ -0.22
SREK1-216ENST00000612404 TEX38Q6PEX7 206 aa13.66□□□□□ -0.22
SREK1-216ENST00000612404 THAP8Q8NA92 274 aa13.66□□□□□ -0.22
SREK1-216ENST00000612404 GNG7O60262 68 aa13.65□□□□□ -0.22
SREK1-216ENST00000612404 CLN5O75503 358 aa13.65□□□□□ -0.22
SREK1-216ENST00000612404 BRI3O95415 125 aa13.65□□□□□ -0.22
SREK1-216ENST00000612404 PSMB8P28062 276 aa13.65□□□□□ -0.22
SREK1-216ENST00000612404 ELLP55199 621 aaPredicted RBP13.65□□□□□ -0.22
SREK1-216ENST00000612404 ZNF767PQ75MW2 155 aa13.65□□□□□ -0.22
SREK1-216ENST00000612404 EEF1AKMT3Q96AZ1 226 aa13.65□□□□□ -0.22
SREK1-216ENST00000612404 PSMG3Q9BT73 122 aaPredicted RBP13.65□□□□□ -0.22
SREK1-216ENST00000612404 TIMM9Q9Y5J7 89 aa13.65□□□□□ -0.22
SREK1-216ENST00000612404 C2CD3Q4AC94 2353 aa13.64□□□□□ -0.23
SREK1-216ENST00000612404 IGKV1D-37A0A075B6S9 117 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms