RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 VENTXO95231 258 aa17.7■□□□□ 0.42
UBE3C-209ENST00000611269 RPL29P47914 159 aaKnown RBP17.7■□□□□ 0.42
UBE3C-209ENST00000611269 C9orf139Q6ZV77 190 aa17.7■□□□□ 0.42
UBE3C-209ENST00000611269 MEGF9Q9H1U4 602 aa17.7■□□□□ 0.42
UBE3C-209ENST00000611269 RPS10P5Q9NQ39 176 aa17.7■□□□□ 0.42
UBE3C-209ENST00000611269 MDFIC2A0A1B0GVS7 189 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 MIC13Q5XKP0 118 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 TMEM144Q7Z5S9 345 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 CACNG8Q8WXS5 425 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 H3BQ15 152 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 HMGB3O15347 200 aaKnown RBP17.69■□□□□ 0.42
UBE3C-209ENST00000611269 EIF3GO75821 320 aaKnown RBP eCLIP17.69■□□□□ 0.42
UBE3C-209ENST00000611269 SNRNP70P08621 437 aaKnown RBP17.69■□□□□ 0.42
UBE3C-209ENST00000611269 GPX4P36969 197 aaPredicted RBP17.69■□□□□ 0.42
UBE3C-209ENST00000611269 SRP14P37108 136 aaKnown RBP17.69■□□□□ 0.42
UBE3C-209ENST00000611269 PSG5Q15238 335 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 DEFB112Q30KQ8 113 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 FBLN7Q53RD9 439 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 SLC35E3Q7Z769 313 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 MMD2Q8IY49 270 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 GSX1Q9H4S2 264 aaPredicted RBP17.69■□□□□ 0.42
UBE3C-209ENST00000611269 TUBA4BQ9H853 241 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 MANBALQ9NQG1 85 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 TMEM160Q9NX00 188 aa17.69■□□□□ 0.42
UBE3C-209ENST00000611269 PUS1Q9Y606 427 aaKnown RBP eCLIP17.69■□□□□ 0.42
UBE3C-209ENST00000611269 ANK3Q12955 4377 aaKnown RBP17.68■□□□□ 0.42
UBE3C-209ENST00000611269 HNF1AP20823 631 aa17.68■□□□□ 0.42
UBE3C-209ENST00000611269 BRS3P32247 399 aa17.68■□□□□ 0.42
UBE3C-209ENST00000611269 MAS1LP35410 378 aa17.68■□□□□ 0.42
UBE3C-209ENST00000611269 WT1-ASQ06250 92 aa17.68■□□□□ 0.42
UBE3C-209ENST00000611269 PRSS8Q16651 343 aa17.68■□□□□ 0.42
UBE3C-209ENST00000611269 GCSAMLQ5JQS6 135 aa17.68■□□□□ 0.42
UBE3C-209ENST00000611269 Q71RC1 249 aaPredicted RBP17.68■□□□□ 0.42
UBE3C-209ENST00000611269 TMPRSS5Q9H3S3 457 aa17.68■□□□□ 0.42
UBE3C-209ENST00000611269 HIVEP2P31629 2446 aa17.68■□□□□ 0.42
UBE3C-209ENST00000611269 LOC105371267A0A1B0GV96 52 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 A0A1W2PPV4 95 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 PSMB3P49720 205 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 SUB1P53999 127 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBE3C-209ENST00000611269 CD69Q07108 199 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 HES1Q14469 280 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 FAM90A2PQ658T7 463 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 TPSG1Q9NRR2 321 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 PRR20EP86478 221 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 PRR20CP86479 221 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 PRR20DP86480 221 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 PRR20BP86481 221 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 PRR20AP86496 221 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 GAMTQ14353 236 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 RNASEH2CQ8TDP1 164 aaKnown RBP17.67■□□□□ 0.42
UBE3C-209ENST00000611269 SSX3Q99909 188 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 C20orf24Q9BUV8 137 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 SIGLEC9Q9Y336 463 aa17.67■□□□□ 0.42
UBE3C-209ENST00000611269 ATF4P18848 351 aaPredicted RBP17.66■□□□□ 0.42
UBE3C-209ENST00000611269 CEBPGP53567 150 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 B2MP61769 119 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 MEF2BQ02080 365 aaPredicted RBP17.66■□□□□ 0.42
UBE3C-209ENST00000611269 AKIRIN2Q53H80 203 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 C10orf55Q5SWW7 151 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 SSMEM1Q8WWF3 244 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 EAF1Q96JC9 268 aaPredicted RBP17.66■□□□□ 0.42
UBE3C-209ENST00000611269 NIPSNAP3BQ9BS92 247 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 SLC45A2Q9UMX9 530 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 F8P00451 2351 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 TNCP24821 2201 aa17.66■□□□□ 0.42
UBE3C-209ENST00000611269 MOSP00540 346 aa17.65■□□□□ 0.42
UBE3C-209ENST00000611269 MRPL41Q8IXM3 137 aaKnown RBP17.65■□□□□ 0.42
UBE3C-209ENST00000611269 STPG3Q8N7X2 389 aa17.65■□□□□ 0.42
UBE3C-209ENST00000611269 TVP23CQ96ET8 276 aa17.65■□□□□ 0.42
UBE3C-209ENST00000611269 FAM106CPP0CH98 169 aa17.65■□□□□ 0.42
UBE3C-209ENST00000611269 CNTFRP26992 372 aa17.65■□□□□ 0.42
UBE3C-209ENST00000611269 CD81P60033 236 aa17.65■□□□□ 0.42
UBE3C-209ENST00000611269 OR2T10Q8NGZ9 312 aa17.65■□□□□ 0.42
UBE3C-209ENST00000611269 PIFOQ8TCI5 191 aa17.65■□□□□ 0.42
UBE3C-209ENST00000611269 ZNF48Q96MX3 618 aaPredicted RBP17.65■□□□□ 0.42
UBE3C-209ENST00000611269 LINC00869P0C866 280 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 STAG3L2P0CL84 134 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 STAG3L3P0CL85 134 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 DEFA4P12838 97 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 AKR1C3P42330 323 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 EBI3Q14213 229 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 PVRIGQ6DKI7 326 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 C15orf54Q8N8G6 183 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 MTORP42345 2549 aa17.64■□□□□ 0.41
UBE3C-209ENST00000611269 COLCA2A8K830 154 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 MLANAQ16655 118 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 PPP1R27Q86WC6 154 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 TMEM250H0YL14 139 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 H3BUX3 64 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 ACTL6BO94805 426 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 TMEM11P17152 192 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 COMPP49747 757 aaPredicted RBP17.63■□□□□ 0.41
UBE3C-209ENST00000611269 SLC16A13Q7RTY0 426 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 Q8N6K4 173 aa17.63■□□□□ 0.41
UBE3C-209ENST00000611269 METTL1Q9UBP6 276 aaKnown RBP17.63■□□□□ 0.41
UBE3C-209ENST00000611269 IGKV1OR2-108A0A075B7D4 117 aa17.62■□□□□ 0.41
UBE3C-209ENST00000611269 IGLC7A0M8Q6 106 aa17.62■□□□□ 0.41
UBE3C-209ENST00000611269 RPL27AP46776 148 aaKnown RBP17.62■□□□□ 0.41
UBE3C-209ENST00000611269 RHOBP62745 196 aa17.62■□□□□ 0.41
UBE3C-209ENST00000611269 ZNF114Q8NC26 417 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms