RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 C10orf55Q5SWW7 151 aa11.8□□□□□ -0.52
PCDHB16-201ENST00000609684 TREML4Q6UXN2 200 aa11.8□□□□□ -0.52
PCDHB16-201ENST00000609684 DOPEY2Q9Y3R5 2298 aa11.8□□□□□ -0.52
PCDHB16-201ENST00000609684 TIMM23O14925 209 aa11.8□□□□□ -0.52
PCDHB16-201ENST00000609684 HOXA5P20719 270 aa11.8□□□□□ -0.52
PCDHB16-201ENST00000609684 DOCK7Q96N67 2140 aa11.8□□□□□ -0.52
PCDHB16-201ENST00000609684 HEATR5AQ86XA9 2040 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 C7orf71A4D174 169 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 AREGP15514 252 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 TCF23Q7RTU1 214 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 THBDP07204 575 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 ZNF56Q15929 161 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 Q6P435 159 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 M0R381 172 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 GCSHP23434 173 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 PRELID3AQ96N28 172 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 TMEM70Q9BUB7 260 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 RFNGQ9Y644 331 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 CACNA1BQ00975 2339 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 TRAV9-1A0A075B6T8 112 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 IGHV3-11P01762 117 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 LY6DQ14210 128 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 CIARTQ8N365 385 aaPredicted RBP11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 VOPP1Q96AW1 172 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 ZNF524Q96C55 264 aa11.79□□□□□ -0.52
PCDHB16-201ENST00000609684 NOTCH4Q99466 2003 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 A0A0G2JLM5 398 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 HEPN1Q6WQI6 88 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 RNF125Q96EQ8 232 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 IZUMO1RA6ND01 250 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 E9PQ18 207 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 H3BVH4 76 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 WNK2Q9Y3S1 2297 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 GGTLC1Q9BX51 225 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 OTORQ9NRC9 128 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 TRBV6-6A0A0A6YYG2 114 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 ETV2O00321 342 aaPredicted RBP11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 HERPUD1Q15011 391 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 COQ2Q96H96 371 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 ANAPC1Q9H1A4 1944 aa11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 F11RQ9Y624 299 aaKnown RBP11.78□□□□□ -0.52
PCDHB16-201ENST00000609684 MLNRO43193 412 aa11.77□□□□□ -0.52
PCDHB16-201ENST00000609684 IGHG3P01860 377 aa11.77□□□□□ -0.52
PCDHB16-201ENST00000609684 SMAGPQ0VAQ4 97 aa11.77□□□□□ -0.52
PCDHB16-201ENST00000609684 ZNF672Q499Z4 452 aaPredicted RBP11.77□□□□□ -0.52
PCDHB16-201ENST00000609684 PLXNA4Q9HCM2 1894 aa11.77□□□□□ -0.52
PCDHB16-201ENST00000609684 LY6G6EA0A0G2JKS1 128 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 C9JCJ5 164 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 APOHP02749 345 aaPredicted RBP11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 FAM19A2Q8N3H0 131 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 C18orf15Q96N68 181 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 KIR2DL4Q99706 377 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 U3KQA8 63 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 MBD3L4A6NDZ8 208 aaPredicted RBP11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 MBD3L3A6NE82 208 aaPredicted RBP11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 MBD3L5A6NJ08 208 aaPredicted RBP11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 TGFAP01135 160 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 DNLZQ5SXM8 178 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 MBD3L2Q8NHZ7 208 aaPredicted RBP11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 LRRK1Q38SD2 2015 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 TMEM200BQ69YZ2 307 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 RAB37Q96AX2 223 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 EPDR1Q9UM22 224 aa11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 SOX21Q9Y651 276 aaPredicted RBP11.77□□□□□ -0.53
PCDHB16-201ENST00000609684 TICRRQ7Z2Z1 1910 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 TRAV3A0A0B4J244 114 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 TMEM238LA0A1B0GVL6 79 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 A6NJY4 79 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 GAGE10A6NGK3 116 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 ASCL4Q6XD76 172 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 C20orf204Q6ZNR8 217 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 TMEM170AQ8WVE7 144 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 TNFRSF14Q92956 283 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 LINC00473A8K010 186 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 ZNF414Q96IQ9 312 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 HIST1H4GQ99525 98 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 REG4Q9BYZ8 158 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 ZNF257Q9Y2Q1 563 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 TMEM178BH3BS89 294 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 SERF1AO75920 110 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 CFPP27918 469 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 C19orf54Q5BKX5 351 aa11.76□□□□□ -0.53
PCDHB16-201ENST00000609684 IGHV2-26A0A0B4J1V2 119 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 A0A0G2JNJ9 132 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 ASIPP42127 132 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 LINC00205P59089 165 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 SRSF4Q08170 494 aaKnown RBP11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 REC114Q7Z4M0 266 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
PCDHB16-201ENST00000609684 GSN-AS1Q9NRJ2 163 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms