RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 MISP3Q96FF7 219 aa12.89□□□□□ -0.35
PMF1-206ENST00000606952 SLC35E1Q96K37 410 aa12.89□□□□□ -0.35
PMF1-206ENST00000606952 UBE2L5PA0A1B0GUS4 154 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 FAM223BA6NKX1 122 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 PRH1P02810 166 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 IFITM2Q01629 132 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 TMEM95Q3KNT9 176 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 FAM223AQ8IWN6 122 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 RNF152Q8N8N0 203 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 NECAP1Q8NC96 275 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 TAF15Q92804 592 aaKnown RBP eCLIP12.88□□□□□ -0.35
PMF1-206ENST00000606952 PSMG3Q9BT73 122 aaPredicted RBP12.88□□□□□ -0.35
PMF1-206ENST00000606952 TIMM9Q9Y5J7 89 aa12.88□□□□□ -0.35
PMF1-206ENST00000606952 SPP1P10451 314 aa12.87□□□□□ -0.35
PMF1-206ENST00000606952 PSMB8P28062 276 aa12.87□□□□□ -0.35
PMF1-206ENST00000606952 MLANAQ16655 118 aa12.87□□□□□ -0.35
PMF1-206ENST00000606952 TEPPQ6URK8 271 aa12.87□□□□□ -0.35
PMF1-206ENST00000606952 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
PMF1-206ENST00000606952 OR2T6Q8NHC8 308 aa12.87□□□□□ -0.35
PMF1-206ENST00000606952 WIPF2Q8TF74 440 aaPredicted RBP12.87□□□□□ -0.35
PMF1-206ENST00000606952 SCARB1Q8WTV0 552 aa12.87□□□□□ -0.35
PMF1-206ENST00000606952 GNPNAT1Q96EK6 184 aaPredicted RBP12.87□□□□□ -0.35
PMF1-206ENST00000606952 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
PMF1-206ENST00000606952 LINC00527Q9UJ94 153 aa12.87□□□□□ -0.35
PMF1-206ENST00000606952 IGKV1OR2-108A0A075B7D4 117 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 RGS13O14921 159 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 NDUFB8O95169 186 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 CFDP00746 253 aaPredicted RBP12.86□□□□□ -0.35
PMF1-206ENST00000606952 SEC11BP0C7V7 166 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 RHOGP84095 191 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 TEX261Q6UWH6 196 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 BTNL8Q6UX41 500 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 MYOZ3Q8TDC0 251 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 CXorf58Q96LI9 332 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 TXN2Q99757 166 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 FBXL7Q9UJT9 491 aa12.86□□□□□ -0.35
PMF1-206ENST00000606952 F8W735 103 aaPredicted RBP12.85□□□□□ -0.35
PMF1-206ENST00000606952 CLN5O75503 358 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 OR2J3O76001 311 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 CRYBA1P05813 215 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 ELANEP08246 267 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 ATP6V0CP27449 155 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 RND2P52198 227 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 SLC35B1P78383 322 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 AKR1C1Q04828 323 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 FOXE3Q13461 319 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 EIF5AL1Q6IS14 154 aaKnown RBP12.85□□□□□ -0.35
PMF1-206ENST00000606952 HSD17B11Q8NBQ5 300 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 OR2G3Q8NGZ4 309 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 ZNF502Q8TBZ5 544 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 SCGB1C1Q8TD33 95 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 TRGV9Q99603 122 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 MGST2Q99735 147 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 NPCDR1Q9BY65 106 aa12.85□□□□□ -0.35
PMF1-206ENST00000606952 IGKV1D-37A0A075B6S9 117 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 PSMB11A5LHX3 300 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 MFSD2BA6NFX1 497 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 FGF7P21781 194 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 MFAP4P55083 255 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 NPIPB3Q92617 1050 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 GGTLC1Q9BX51 225 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 C21orf62Q9NYP8 219 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 CUBNO60494 3623 aa12.84□□□□□ -0.35
PMF1-206ENST00000606952 TRBV7-1A0A0A6YYK4 115 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 SMCO3A2RU48 225 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 IGLC1P0CG04 106 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 NPBWR1P48145 328 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 SERF2P84101 59 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 RUNX1Q01196 453 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 ACSM6Q6P461 480 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 TEX38Q6PEX7 206 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 ZNF767PQ75MW2 155 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 ACY3Q96HD9 319 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 RSG1Q9BU20 258 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 ZNF355PQ9NSJ1 428 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 GAR1Q9NY12 217 aaKnown RBP12.83□□□□□ -0.36
PMF1-206ENST00000606952 SLC45A2Q9UMX9 530 aa12.83□□□□□ -0.36
PMF1-206ENST00000606952 TEP1Q99973 2627 aaKnown RBP12.83□□□□□ -0.36
PMF1-206ENST00000606952 TRAV30A0A087WSZ9 112 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 TCRBV4S1A1TA0A5B7 111 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 C17orf112F2Z3M2 114 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 AGPAT2O15120 278 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 IFNA7P01567 189 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 TRGV3P03979 118 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 RPL29P47914 159 aaKnown RBP12.82□□□□□ -0.36
PMF1-206ENST00000606952 CAMLGP49069 296 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 RAB9AP51151 201 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 TPPP2P59282 170 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 PRR20EP86478 221 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 PRR20CP86479 221 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 PRR20DP86480 221 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 PRR20BP86481 221 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 PRR20AP86496 221 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 RAB31Q13636 194 aa12.82□□□□□ -0.36
PMF1-206ENST00000606952 KIAA0141Q14154 515 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms