RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 C19orf73Q9NVV2 129 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 TECRQ9NZ01 308 aaKnown RBP11.85□□□□□ -0.51
RPS28-203ENST00000600659 TBC1D24Q9ULP9 559 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 UFC1Q9Y3C8 167 aa11.85□□□□□ -0.51
RPS28-203ENST00000600659 TENM3Q9P273 2699 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 CEBPZOSA8MTT3 80 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 MPTX1A8MV57 137 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 A8MZ25 164 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 TMEM50AO95807 157 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
RPS28-203ENST00000600659 DTD1Q8TEA8 209 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 MARC2Q969Z3 335 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 RBKSQ9H477 322 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 PALMDQ9NP74 551 aa11.84□□□□□ -0.51
RPS28-203ENST00000600659 HEYLQ9NQ87 328 aaPredicted RBP11.84□□□□□ -0.51
RPS28-203ENST00000600659 DAZ1Q9NQZ3 744 aaKnown RBP11.84□□□□□ -0.51
RPS28-203ENST00000600659 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
RPS28-203ENST00000600659 MRPL27Q9P0M9 148 aaKnown RBP11.84□□□□□ -0.51
RPS28-203ENST00000600659 CENPXA8MT69 81 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 K7EMT4 169 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 NUPL2O15504 423 aaKnown RBP11.83□□□□□ -0.52
RPS28-203ENST00000600659 ZNF207O43670 478 aaKnown RBP11.83□□□□□ -0.52
RPS28-203ENST00000600659 GNG7O60262 68 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 CD7P09564 240 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 FRMD6-AS1P0C7T7 363 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 OPRK1P41145 380 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 GGNBP1Q5YKI7 109 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 LYG2Q86SG7 212 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 OR4X1Q8NH49 305 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 C20orf85Q9H1P6 137 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 ZFAND3Q9H8U3 227 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 TMED3Q9Y3Q3 217 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 STAB2Q8WWQ8 2551 aa11.83□□□□□ -0.52
RPS28-203ENST00000600659 C15orf62A8K5M9 175 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 CLN5O75503 358 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 ADAP1O75689 374 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 IGKV1-17P01599 117 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 HOXB5P09067 269 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 NPY1RP25929 384 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 NPBWR1P48145 328 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 RELQ04864 619 aaPredicted RBP11.82□□□□□ -0.52
RPS28-203ENST00000600659 PRSS54Q6PEW0 395 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 DUSP18Q8NEJ0 188 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 OR1S1Q8NH92 325 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 RNASEH2CQ8TDP1 164 aaKnown RBP11.82□□□□□ -0.52
RPS28-203ENST00000600659 ASCL2Q99929 193 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 WFDC10AQ9H1F0 79 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 CACFD1Q9UGQ2 172 aa11.82□□□□□ -0.52
RPS28-203ENST00000600659 PIGBOS1A0A0B4J2F0 54 aa11.81□□□□□ -0.52
RPS28-203ENST00000600659 TCRBP04435 133 aa11.81□□□□□ -0.52
RPS28-203ENST00000600659 IFITM3Q01628 133 aa11.81□□□□□ -0.52
RPS28-203ENST00000600659 TOMM20LQ6UXN7 152 aa11.81□□□□□ -0.52
RPS28-203ENST00000600659 OR52B4Q8NGK2 314 aa11.81□□□□□ -0.52
RPS28-203ENST00000600659 S100ZQ8WXG8 99 aa11.81□□□□□ -0.52
RPS28-203ENST00000600659 C20orf24Q9BUV8 137 aa11.81□□□□□ -0.52
RPS28-203ENST00000600659 FAM90A26D6RGX4 464 aa11.8□□□□□ -0.52
RPS28-203ENST00000600659 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
RPS28-203ENST00000600659 TMEM116Q8NCL8 245 aa11.8□□□□□ -0.52
RPS28-203ENST00000600659 NEURL2Q9BR09 285 aa11.8□□□□□ -0.52
RPS28-203ENST00000600659 SMPXQ9UHP9 88 aa11.8□□□□□ -0.52
RPS28-203ENST00000600659 U3KQ87 197 aa11.8□□□□□ -0.52
RPS28-203ENST00000600659 TRAV25A0A0B4J276 109 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 SCAF4O95104 1147 aaKnown RBP11.79□□□□□ -0.52
RPS28-203ENST00000600659 IAPPP10997 89 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 RND2P52198 227 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 CD81P60033 236 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 LINC00322Q6ZN03 302 aaPredicted RBP11.79□□□□□ -0.52
RPS28-203ENST00000600659 ZNF600Q6ZNG1 722 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 OR4D5Q8NGN0 318 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 MITD1Q8WV92 249 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 HIPK2Q9H2X6 1198 aa11.79□□□□□ -0.52
RPS28-203ENST00000600659 PUS1Q9Y606 427 aaKnown RBP eCLIP11.79□□□□□ -0.52
RPS28-203ENST00000600659 DNAH7Q8WXX0 4024 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 PRSS46E5RG02 174 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 CHEK1O14757 476 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 TSPAN4O14817 238 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 UPK1BO75841 260 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 IFNA10P01566 189 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 APOHP02749 345 aaPredicted RBP11.78□□□□□ -0.52
RPS28-203ENST00000600659 ID3Q02535 119 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 ASAH1Q13510 395 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 TIGITQ495A1 244 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 C4orf46Q504U0 113 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 GTSCR1Q86UQ5 136 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 COQ8AQ8NI60 647 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 RNF2Q99496 336 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 MAGT1Q9H0U3 335 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 NUDT15Q9NV35 164 aa11.78□□□□□ -0.52
RPS28-203ENST00000600659 TRAV6A0A075B6T7 132 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 IGHV3-49A0A0A0MS15 119 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 RPS10-NUDT3A0A1W2PQS6 291 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 YIF1AO95070 293 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 NHLRC4P0CG21 123 aaPredicted RBP11.77□□□□□ -0.53
RPS28-203ENST00000600659 SLC25A4P12235 298 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 ZNF846Q147U1 533 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 FAM90A2PQ658T7 463 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms