RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 C1QL4Q86Z23 238 aa14.81□□□□□ -0.04
UPF1-209ENST00000600310 UBAC2Q8NBM4 344 aa14.81□□□□□ -0.04
UPF1-209ENST00000600310 SMIM8Q96KF7 97 aa14.81□□□□□ -0.04
UPF1-209ENST00000600310 RCL1Q9Y2P8 373 aaKnown RBP14.81□□□□□ -0.04
UPF1-209ENST00000600310 SIX6O95475 246 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 TMEM50AO95807 157 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 NPBWR1P48145 328 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 PAX9P55771 341 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 SYNJ2BPP57105 145 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 TAS2R30P59541 319 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 RAB11AP62491 216 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 SPANXN5Q5MJ07 72 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 ETFRF1Q6IPR1 90 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 OR4C12Q96R67 309 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 ZC4H2Q9NQZ6 224 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 PSENENQ9NZ42 101 aa14.8□□□□□ -0.04
UPF1-209ENST00000600310 MRPL36Q9P0J6 103 aaKnown RBP14.8□□□□□ -0.04
UPF1-209ENST00000600310 K7EPK0 472 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 NUPL2O15504 423 aaKnown RBP14.79□□□□□ -0.04
UPF1-209ENST00000600310 CTSGP08311 255 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 SLC25A4P12235 298 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 ADMP35318 185 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 CD69Q07108 199 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 OXLD1Q5BKU9 147 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 SAMD5Q5TGI4 173 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 OR4X1Q8NH49 305 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 CHRDL1Q9BU40 450 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 GPR61Q9BZJ8 451 aa14.79□□□□□ -0.04
UPF1-209ENST00000600310 STRAPQ9Y3F4 350 aaKnown RBP14.79□□□□□ -0.04
UPF1-209ENST00000600310 SEC14L6B5MCN3 397 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 H3BP45 60 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 LGALS9O00182 355 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 WIPF1O43516 503 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 GNG7O60262 68 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 PRSS54Q6PEW0 395 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 OR9G4Q8NGQ1 327 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 NMES1Q9C002 83 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 MGAT4CQ9UBM8 478 aa14.78□□□□□ -0.04
UPF1-209ENST00000600310 PAIP2BQ9ULR5 123 aaKnown RBP14.78□□□□□ -0.04
UPF1-209ENST00000600310 LSM5Q9Y4Y9 91 aaKnown RBP14.78□□□□□ -0.04
UPF1-209ENST00000600310 MGAM2Q2M2H8 2515 aa14.77□□□□□ -0.04
UPF1-209ENST00000600310 G3V4G9 280 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 TSC22D2O75157 780 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 CLN5O75503 358 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 GPX4P36969 197 aaPredicted RBP14.77□□□□□ -0.05
UPF1-209ENST00000600310 H2BFSP57053 126 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 CYCSP99999 105 aaKnown RBP14.77□□□□□ -0.05
UPF1-209ENST00000600310 RAB32Q13637 225 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 FAM106AQ4KMX7 169 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 C9orf66Q5T8R8 295 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 SLC16A13Q7RTY0 426 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 REC114Q7Z4M0 266 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 TMEM116Q8NCL8 245 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 CACNG8Q8WXS5 425 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 ZNF436Q9C0F3 470 aaPredicted RBP14.77□□□□□ -0.05
UPF1-209ENST00000600310 C11orf1Q9H5F2 150 aa14.77□□□□□ -0.05
UPF1-209ENST00000600310 TMEM14EPQ6UXP3 125 aa14.76□□□□□ -0.05
UPF1-209ENST00000600310 IL34Q6ZMJ4 242 aa14.76□□□□□ -0.05
UPF1-209ENST00000600310 ELOVL1Q9BW60 279 aa14.76□□□□□ -0.05
UPF1-209ENST00000600310 PEMTQ9UBM1 199 aa14.76□□□□□ -0.05
UPF1-209ENST00000600310 TRAV30A0A087WSZ9 112 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 IGHV3-35A0A0C4DH35 117 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 PRSS46E5RG02 174 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 L7N2F9 121 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 INSL3P51460 131 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 RND2P52198 227 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 S100A10P60903 97 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 VAMP2P63027 116 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 RELQ04864 619 aaPredicted RBP14.75□□□□□ -0.05
UPF1-209ENST00000600310 ZNF414Q96IQ9 312 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 MED28Q9H204 178 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 MEGF8Q7Z7M0 2845 aa14.75□□□□□ -0.05
UPF1-209ENST00000600310 NOTCH3Q9UM47 2321 aa14.74□□□□□ -0.05
UPF1-209ENST00000600310 PMS2P5A8MQ11 134 aa14.74□□□□□ -0.05
UPF1-209ENST00000600310 NDUFA4O00483 81 aa14.74□□□□□ -0.05
UPF1-209ENST00000600310 PVALBP20472 110 aaPredicted RBP14.74□□□□□ -0.05
UPF1-209ENST00000600310 UNQ9165/PRO28630Q6UXU0 137 aa14.74□□□□□ -0.05
UPF1-209ENST00000600310 NPIPB3Q92617 1050 aa14.74□□□□□ -0.05
UPF1-209ENST00000600310 SIGLEC8Q9NYZ4 499 aa14.74□□□□□ -0.05
UPF1-209ENST00000600310 VWFP04275 2813 aa14.74□□□□□ -0.05
UPF1-209ENST00000600310 PKD1L1Q8TDX9 2849 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 ZNF320A2RRD8 509 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 A8MWP6 167 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 SAP30O75446 220 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 SCGB2A1O75556 95 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 CSN3P07498 182 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 IGLC1P0CG04 106 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 FCN2Q15485 313 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 KPRPQ5T749 579 aaPredicted RBP14.73□□□□□ -0.05
UPF1-209ENST00000600310 OR1S2Q8NGQ3 325 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 TMEM190Q8WZ59 177 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 WDR89Q96FK6 387 aaPredicted RBP14.73□□□□□ -0.05
UPF1-209ENST00000600310 ACY3Q96HD9 319 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 SLC35E1Q96K37 410 aa14.73□□□□□ -0.05
UPF1-209ENST00000600310 DEDDO75618 318 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 IGKV1-17P01599 117 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 METTL15P1P0C7V9 234 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 CXCL3P19876 107 aa14.72□□□□□ -0.05
UPF1-209ENST00000600310 ELLP55199 621 aaPredicted RBP14.72□□□□□ -0.05
UPF1-209ENST00000600310 GAMTQ14353 236 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms