RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 KMT2CQ8NEZ4 4911 aaKnown RBP9.86□□□□□ -0.83
UPF1-208ENST00000600012 PRSS46E5RG02 174 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 C4BPBP20851 252 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 MFAP2P55001 183 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 KRTAP10-11P60412 298 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 HBG1P69891 147 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 HBG2P69892 147 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 CD69Q07108 199 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 UNQ5815/PRO19632Q6UWF5 114 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 SLC35E3Q7Z769 313 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 LINC00482Q8N8I6 264 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 ZNF114Q8NC26 417 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 OR10P1Q8NGE3 313 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 ATP5SQ99766 215 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 LINC00527Q9UJ94 153 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 F11RQ9Y624 299 aaKnown RBP9.86□□□□□ -0.83
UPF1-208ENST00000600012 COL7A1Q02388 2944 aa9.86□□□□□ -0.83
UPF1-208ENST00000600012 PSMB11A5LHX3 300 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 G3V318 75 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 TAAR5O14804 337 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 IGHG2P01859 326 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 PRH1P02810 166 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 CTRB1P17538 263 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 HOXD3P31249 432 aaPredicted RBP9.85□□□□□ -0.83
UPF1-208ENST00000600012 SUB1P53999 127 aaKnown RBP eCLIP9.85□□□□□ -0.83
UPF1-208ENST00000600012 CTRB2Q6GPI1 263 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 SLC51BQ86UW2 128 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 OR5T1Q8NG75 326 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 MISP3Q96FF7 219 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 B9D2Q9BPU9 175 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 MCRIP2Q9BUT9 160 aaKnown RBP9.85□□□□□ -0.83
UPF1-208ENST00000600012 DMRT1Q9Y5R6 373 aa9.85□□□□□ -0.83
UPF1-208ENST00000600012 UBE2L5PA0A1B0GUS4 154 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 NPIPB5A8MRT5 1133 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 SCAF4O95104 1147 aaKnown RBP9.84□□□□□ -0.83
UPF1-208ENST00000600012 CRYGCP07315 174 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 DLK1P80370 383 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 SLC25A24Q6NUK1 477 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 TTC9CQ8N5M4 171 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 OR1P1Q8NH06 330 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 ST8SIA2Q92186 375 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 PINX1Q96BK5 328 aaKnown RBP9.84□□□□□ -0.83
UPF1-208ENST00000600012 NOL4LQ96MY1 436 aaPredicted RBP9.84□□□□□ -0.83
UPF1-208ENST00000600012 WWC2-AS2Q96NR7 200 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 TMEM147Q9BVK8 224 aa9.84□□□□□ -0.83
UPF1-208ENST00000600012 BORCS7-ASMTA0A0B4J1R7 106 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 IGHV3-21A0A0B4J1V1 117 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 TRAV41A0A0B4J266 112 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 SMCO3A2RU48 225 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 DFFBO76075 338 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 CFDP00746 253 aaPredicted RBP9.83□□□□□ -0.84
UPF1-208ENST00000600012 DEFA4P12838 97 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 CRIP2P52943 208 aaPredicted RBP9.83□□□□□ -0.84
UPF1-208ENST00000600012 ATP5IP56385 69 aaPredicted RBP9.83□□□□□ -0.84
UPF1-208ENST00000600012 DEFA5Q01523 94 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 IFITM2Q01629 132 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 MLANAQ16655 118 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 C19orf54Q5BKX5 351 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 PVRIGQ6DKI7 326 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 HSD17B11Q8NBQ5 300 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 FNDC4Q9H6D8 234 aaPredicted RBP9.83□□□□□ -0.84
UPF1-208ENST00000600012 UQCC1Q9NVA1 299 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 ZMAT5Q9UDW3 170 aaKnown RBP9.83□□□□□ -0.84
UPF1-208ENST00000600012 TENM3Q9P273 2699 aa9.83□□□□□ -0.84
UPF1-208ENST00000600012 IGHV3-48P01763 117 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 TPT1P13693 172 aaKnown RBP9.82□□□□□ -0.84
UPF1-208ENST00000600012 OPRK1P41145 380 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 ZNF266Q14584 549 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 ATP6V1FQ16864 119 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 VWC2Q2TAL6 325 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 AKIRIN2Q53H80 203 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 SLC16A13Q7RTY0 426 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 ZNF329Q86UD4 541 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 STOML3Q8TAV4 291 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 RNASEH2CQ8TDP1 164 aaKnown RBP9.82□□□□□ -0.84
UPF1-208ENST00000600012 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 GON7Q9BXV9 100 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 SLA2Q9H6Q3 261 aa9.82□□□□□ -0.84
UPF1-208ENST00000600012 IGLV11-55A0A075B6I3 123 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 NUDT19A8MXV4 375 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 AP4M1O00189 453 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 SOX15O60248 233 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 JTBO76095 146 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 IFNA5P01569 189 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 IGF1P05019 195 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 MYCNOSP40205 109 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 RUNX1Q01196 453 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 BAP18Q8IXM2 172 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 COMMD1Q8N668 190 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 UBAC2Q8NBM4 344 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 SLC35E1Q96K37 410 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 GGACTQ9BVM4 153 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 ZNF355PQ9NSJ1 428 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 MRPL36Q9P0J6 103 aaKnown RBP9.81□□□□□ -0.84
UPF1-208ENST00000600012 RFNGQ9Y644 331 aa9.81□□□□□ -0.84
UPF1-208ENST00000600012 K7EIM0 57 aa9.8□□□□□ -0.84
UPF1-208ENST00000600012 CORTO00230 105 aa9.8□□□□□ -0.84
UPF1-208ENST00000600012 OR2J3O76001 311 aa9.8□□□□□ -0.84
UPF1-208ENST00000600012 MT-CO2P00403 227 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms