RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 S100ZQ8WXG8 99 aa21.29■■□□□ 1
SSBP4-206ENST00000599699 RBKSQ9H477 322 aa21.29■■□□□ 1
SSBP4-206ENST00000599699 C9orf170A2RU37 121 aa21.28■■□□□ 1
SSBP4-206ENST00000599699 LYRM1O43325 122 aa21.28■■□□□ 1
SSBP4-206ENST00000599699 ZNF207O43670 478 aaKnown RBP21.28■■□□□ 1
SSBP4-206ENST00000599699 HOXB5P09067 269 aa21.28■■□□□ 1
SSBP4-206ENST00000599699 C2orf83Q53S99 150 aa21.28■■□□□ 1
SSBP4-206ENST00000599699 C11orf87Q6NUJ2 197 aa21.28■■□□□ 1
SSBP4-206ENST00000599699 DTD1Q8TEA8 209 aa21.28■■□□□ 1
SSBP4-206ENST00000599699 CCDC32Q9BV29 185 aa21.28■■□□□ 1
SSBP4-206ENST00000599699 TMED3Q9Y3Q3 217 aa21.28■■□□□ 1
SSBP4-206ENST00000599699 RPS10-NUDT3A0A1W2PQS6 291 aa21.27■■□□□ 1
SSBP4-206ENST00000599699 PLA2G10O15496 165 aa21.27■■□□□ 1
SSBP4-206ENST00000599699 IFNA10P01566 189 aa21.27■■□□□ 1
SSBP4-206ENST00000599699 C8orf88P0DMB2 117 aa21.27■■□□□ 1
SSBP4-206ENST00000599699 MLANAQ16655 118 aa21.27■■□□□ 1
SSBP4-206ENST00000599699 C4orf46Q504U0 113 aa21.27■■□□□ 1
SSBP4-206ENST00000599699 WDR89Q96FK6 387 aaPredicted RBP21.27■■□□□ 1
SSBP4-206ENST00000599699 FNDC4Q9H6D8 234 aaPredicted RBP21.27■■□□□ 1
SSBP4-206ENST00000599699 ZNF785A8K8V0 405 aa21.26■□□□□ 0.99
SSBP4-206ENST00000599699 OR4E1P0C645 316 aa21.26■□□□□ 0.99
SSBP4-206ENST00000599699 FRMD6-AS1P0C7T7 363 aa21.26■□□□□ 0.99
SSBP4-206ENST00000599699 IGHV4-30-4P0DP06 118 aa21.26■□□□□ 0.99
SSBP4-206ENST00000599699 ANXA7P20073 488 aaKnown RBP21.26■□□□□ 0.99
SSBP4-206ENST00000599699 NPY1RP25929 384 aa21.26■□□□□ 0.99
SSBP4-206ENST00000599699 NOXA1Q86UR1 476 aa21.26■□□□□ 0.99
SSBP4-206ENST00000599699 TMEM61Q8N0U2 210 aa21.26■□□□□ 0.99
SSBP4-206ENST00000599699 C15orf62A8K5M9 175 aa21.25■□□□□ 0.99
SSBP4-206ENST00000599699 CD81P60033 236 aa21.25■□□□□ 0.99
SSBP4-206ENST00000599699 RBPMS2Q6ZRY4 209 aaKnown RBP21.25■□□□□ 0.99
SSBP4-206ENST00000599699 COQ8AQ8NI60 647 aa21.25■□□□□ 0.99
SSBP4-206ENST00000599699 RNASEH2CQ8TDP1 164 aaKnown RBP21.25■□□□□ 0.99
SSBP4-206ENST00000599699 PTTG2Q9NZH5 202 aa21.25■□□□□ 0.99
SSBP4-206ENST00000599699 K7EMT4 169 aa21.24■□□□□ 0.99
SSBP4-206ENST00000599699 SCGB2A1O75556 95 aa21.24■□□□□ 0.99
SSBP4-206ENST00000599699 SCAF4O95104 1147 aaKnown RBP21.24■□□□□ 0.99
SSBP4-206ENST00000599699 TMEM50AO95807 157 aa21.24■□□□□ 0.99
SSBP4-206ENST00000599699 NHLRC4P0CG21 123 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-206ENST00000599699 SLC25A6P12236 298 aa21.24■□□□□ 0.99
SSBP4-206ENST00000599699 DHRS2Q13268 280 aa21.24■□□□□ 0.99
SSBP4-206ENST00000599699 GGNBP1Q5YKI7 109 aa21.24■□□□□ 0.99
SSBP4-206ENST00000599699 LYG2Q86SG7 212 aa21.24■□□□□ 0.99
SSBP4-206ENST00000599699 U3KQ87 197 aa21.24■□□□□ 0.99
SSBP4-206ENST00000599699 PITX3O75364 302 aa21.23■□□□□ 0.99
SSBP4-206ENST00000599699 OR4X1Q8NH49 305 aa21.23■□□□□ 0.99
SSBP4-206ENST00000599699 NEURL2Q9BR09 285 aa21.23■□□□□ 0.99
SSBP4-206ENST00000599699 TUBA4BQ9H853 241 aa21.23■□□□□ 0.99
SSBP4-206ENST00000599699 MRPL36Q9P0J6 103 aaKnown RBP21.23■□□□□ 0.99
SSBP4-206ENST00000599699 CLN5O75503 358 aa21.22■□□□□ 0.99
SSBP4-206ENST00000599699 ZNF600Q6ZNG1 722 aa21.22■□□□□ 0.99
SSBP4-206ENST00000599699 TMEM170AQ8WVE7 144 aa21.22■□□□□ 0.99
SSBP4-206ENST00000599699 C20orf85Q9H1P6 137 aa21.22■□□□□ 0.99
SSBP4-206ENST00000599699 BATF3Q9NR55 127 aa21.22■□□□□ 0.99
SSBP4-206ENST00000599699 COL7A1Q02388 2944 aa21.22■□□□□ 0.99
SSBP4-206ENST00000599699 ETFRF1Q6IPR1 90 aa21.21■□□□□ 0.99
SSBP4-206ENST00000599699 ZNF414Q96IQ9 312 aa21.21■□□□□ 0.99
SSBP4-206ENST00000599699 DNAH9Q9NYC9 4486 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 TRAV25A0A0B4J276 109 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 FAM90A26D6RGX4 464 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 MED6O75586 246 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 ADAP1O75689 374 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 IFNA21P01568 189 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 IFNA4P05014 189 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 CD7P09564 240 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 IAPPP10997 89 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 SLC25A4P12235 298 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 TOMM20LQ6UXN7 152 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 SBSPONQ8IVN8 264 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 OR10C1Q96KK4 312 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 GINS3Q9BRX5 216 aa21.2■□□□□ 0.98
SSBP4-206ENST00000599699 WDR12Q9GZL7 423 aaKnown RBP21.2■□□□□ 0.98
SSBP4-206ENST00000599699 PUS1Q9Y606 427 aaKnown RBP eCLIP21.2■□□□□ 0.98
SSBP4-206ENST00000599699 IGHV3-49A0A0A0MS15 119 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 TRAV14DV4A0A0A6YYC5 116 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 TCRBP04435 133 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 RND2P52198 227 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 ZNF846Q147U1 533 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 LAMTOR1Q6IAA8 161 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 SLC16A13Q7RTY0 426 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 TMEM116Q8NCL8 245 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 OR52B4Q8NGK2 314 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 MAGT1Q9H0U3 335 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 SMPXQ9UHP9 88 aa21.19■□□□□ 0.98
SSBP4-206ENST00000599699 TRAV6A0A075B6T7 132 aa21.18■□□□□ 0.98
SSBP4-206ENST00000599699 TRAV30A0A087WSZ9 112 aa21.18■□□□□ 0.98
SSBP4-206ENST00000599699 IGHV7-4-1A0A0J9YVY3 117 aa21.18■□□□□ 0.98
SSBP4-206ENST00000599699 PRSS54Q6PEW0 395 aa21.18■□□□□ 0.98
SSBP4-206ENST00000599699 C19orf73Q9NVV2 129 aa21.18■□□□□ 0.98
SSBP4-206ENST00000599699 PAIP2BQ9ULR5 123 aaKnown RBP21.18■□□□□ 0.98
SSBP4-206ENST00000599699 A8MZ25 164 aa21.17■□□□□ 0.98
SSBP4-206ENST00000599699 ATP5IP56385 69 aaPredicted RBP21.17■□□□□ 0.98
SSBP4-206ENST00000599699 TIGITQ495A1 244 aa21.17■□□□□ 0.98
SSBP4-206ENST00000599699 MZT2BQ6NZ67 158 aa21.17■□□□□ 0.98
SSBP4-206ENST00000599699 ACY3Q96HD9 319 aa21.17■□□□□ 0.98
SSBP4-206ENST00000599699 RHPN1-AS1Q9BWJ2 59 aa21.17■□□□□ 0.98
SSBP4-206ENST00000599699 NUDT15Q9NV35 164 aa21.17■□□□□ 0.98
SSBP4-206ENST00000599699 FAM240BA0A1B0GVZ2 78 aa21.16■□□□□ 0.98
SSBP4-206ENST00000599699 CIB3Q96Q77 187 aaPredicted RBP21.16■□□□□ 0.98
SSBP4-206ENST00000599699 IGHV3OR16-13A0A075B7E8 117 aa21.15■□□□□ 0.98
SSBP4-206ENST00000599699 IGHV3-74A0A0B4J1X5 117 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms