RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 OR1L6Q8NGR2 347 aa14.02□□□□□ -0.17
PNKP-213ENST00000599543 GGTLC1Q9BX51 225 aa14.02□□□□□ -0.17
PNKP-213ENST00000599543 F11RQ9Y624 299 aaKnown RBP14.02□□□□□ -0.17
PNKP-213ENST00000599543 OR2T8A6NH00 312 aa14.01□□□□□ -0.17
PNKP-213ENST00000599543 JTBO76095 146 aa14.01□□□□□ -0.17
PNKP-213ENST00000599543 C8orf88P0DMB2 117 aa14.01□□□□□ -0.17
PNKP-213ENST00000599543 HOXA1P49639 335 aaPredicted RBP14.01□□□□□ -0.17
PNKP-213ENST00000599543 TMEM190Q8WZ59 177 aa14.01□□□□□ -0.17
PNKP-213ENST00000599543 IL22RA2Q969J5 263 aa14.01□□□□□ -0.17
PNKP-213ENST00000599543 BSCL2Q96G97 398 aaPredicted RBP14.01□□□□□ -0.17
PNKP-213ENST00000599543 PDCD10Q9BUL8 212 aa14.01□□□□□ -0.17
PNKP-213ENST00000599543 ZNF436Q9C0F3 470 aaPredicted RBP14.01□□□□□ -0.17
PNKP-213ENST00000599543 C20orf85Q9H1P6 137 aa14.01□□□□□ -0.17
PNKP-213ENST00000599543 LOC102724200A0A096LPH7 203 aaPredicted RBP14□□□□□ -0.17
PNKP-213ENST00000599543 C9orf170A2RU37 121 aa14□□□□□ -0.17
PNKP-213ENST00000599543 IGHV3-48P01763 117 aa14□□□□□ -0.17
PNKP-213ENST00000599543 TCRBP04435 133 aa14□□□□□ -0.17
PNKP-213ENST00000599543 HOXB5P09067 269 aa14□□□□□ -0.17
PNKP-213ENST00000599543 OR4E1P0C645 316 aa14□□□□□ -0.17
PNKP-213ENST00000599543 UBE2MP61081 183 aaKnown RBP14□□□□□ -0.17
PNKP-213ENST00000599543 C4orf46Q504U0 113 aa14□□□□□ -0.17
PNKP-213ENST00000599543 NMSQ5H8A3 153 aa14□□□□□ -0.17
PNKP-213ENST00000599543 FAM219AQ8IW50 185 aa14□□□□□ -0.17
PNKP-213ENST00000599543 OR2C3Q8N628 320 aa14□□□□□ -0.17
PNKP-213ENST00000599543 MISP3Q96FF7 219 aa14□□□□□ -0.17
PNKP-213ENST00000599543 DAZ1Q9NQZ3 744 aaKnown RBP14□□□□□ -0.17
PNKP-213ENST00000599543 CTNNBIP1Q9NSA3 81 aaPredicted RBP14□□□□□ -0.17
PNKP-213ENST00000599543 A0A0B4J2A0 478 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 SULT1A3P0DMM9 295 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 SULT1A4P0DMN0 295 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 SRPXP78539 464 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 DHRS2Q13268 280 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 SPSB3Q6PJ21 355 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 NUDT15Q9NV35 164 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 C21orf62Q9NYP8 219 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 SHPKQ9UHJ6 478 aa13.99□□□□□ -0.17
PNKP-213ENST00000599543 FAM240BA0A1B0GVZ2 78 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 CEBPZOSA8MTT3 80 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 ADAP1O75689 374 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 ASAH1Q13510 395 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 LYG2Q86SG7 212 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 UBAC2Q8NBM4 344 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 PINX1Q96BK5 328 aaKnown RBP13.98□□□□□ -0.17
PNKP-213ENST00000599543 ATP6V0BQ99437 205 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 SPAG8Q99932 426 aaPredicted RBP13.98□□□□□ -0.17
PNKP-213ENST00000599543 SEC22CQ9BRL7 303 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 ENY2Q9NPA8 101 aa13.98□□□□□ -0.17
PNKP-213ENST00000599543 NDUFA4O00483 81 aa13.97□□□□□ -0.17
PNKP-213ENST00000599543 SPCS3P61009 180 aa13.97□□□□□ -0.17
PNKP-213ENST00000599543 ERHP84090 104 aaKnown RBP13.97□□□□□ -0.17
PNKP-213ENST00000599543 SMCO1Q147U7 214 aa13.97□□□□□ -0.17
PNKP-213ENST00000599543 OR1S1Q8NH92 325 aa13.97□□□□□ -0.17
PNKP-213ENST00000599543 SCARB1Q8WTV0 552 aa13.97□□□□□ -0.17
PNKP-213ENST00000599543 C20orf24Q9BUV8 137 aa13.97□□□□□ -0.17
PNKP-213ENST00000599543 K7EIM0 57 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 H2AFB2P0C5Z0 115 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 RNASE2P10153 161 aaKnown RBP13.96□□□□□ -0.17
PNKP-213ENST00000599543 Q56UQ5 140 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 GGNBP1Q5YKI7 109 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 LAMTOR1Q6IAA8 161 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 MZT2BQ6NZ67 158 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 OR1P1Q8NH06 330 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 OVOL2Q9BRP0 275 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 CHRDL1Q9BU40 450 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 RBKSQ9H477 322 aa13.96□□□□□ -0.17
PNKP-213ENST00000599543 HEYLQ9NQ87 328 aaPredicted RBP13.96□□□□□ -0.17
PNKP-213ENST00000599543 EPPK1P58107 5090 aaKnown RBP13.95□□□□□ -0.18
PNKP-213ENST00000599543 HYDINQ4G0P3 5121 aa13.95□□□□□ -0.18
PNKP-213ENST00000599543 MPTX1A8MV57 137 aa13.95□□□□□ -0.18
PNKP-213ENST00000599543 TSPAN4O14817 238 aa13.95□□□□□ -0.18
PNKP-213ENST00000599543 SNCAP37840 140 aa13.95□□□□□ -0.18
PNKP-213ENST00000599543 AARDQ4LEZ3 155 aa13.95□□□□□ -0.18
PNKP-213ENST00000599543 LRTM2Q8N967 370 aa13.95□□□□□ -0.18
PNKP-213ENST00000599543 UBQLN2Q9UHD9 624 aa13.95□□□□□ -0.18
PNKP-213ENST00000599543 IGHV3OR16-8A0A075B7F1 116 aa13.94□□□□□ -0.18
PNKP-213ENST00000599543 F8W735 103 aaPredicted RBP13.94□□□□□ -0.18
PNKP-213ENST00000599543 APOC4P55056 127 aa13.94□□□□□ -0.18
PNKP-213ENST00000599543 OR52E5Q8NH55 327 aa13.94□□□□□ -0.18
PNKP-213ENST00000599543 COQ8AQ8NI60 647 aa13.94□□□□□ -0.18
PNKP-213ENST00000599543 ENKURQ8TC29 256 aa13.94□□□□□ -0.18
PNKP-213ENST00000599543 A0A1B0GU03 582 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 DUXBA0A1W2PPF3 345 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 I3L2K1 104 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 CCSO14618 274 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 MT-CO2P00403 227 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 IAPPP10997 89 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 ADMP35318 185 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 TNFRSF9Q07011 255 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 MLANAQ16655 118 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 NRARPQ7Z6K4 114 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 ZNF114Q8NC26 417 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 MAGT1Q9H0U3 335 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 HSPB7Q9UBY9 170 aa13.93□□□□□ -0.18
PNKP-213ENST00000599543 OR4C46A6NHA9 309 aa13.92□□□□□ -0.18
PNKP-213ENST00000599543 C15orf62A8K5M9 175 aa13.92□□□□□ -0.18
PNKP-213ENST00000599543 K7EMT4 169 aa13.92□□□□□ -0.18
PNKP-213ENST00000599543 NUPL2O15504 423 aaKnown RBP13.92□□□□□ -0.18
PNKP-213ENST00000599543 ZNF207O43670 478 aaKnown RBP13.92□□□□□ -0.18
PNKP-213ENST00000599543 RELQ04864 619 aaPredicted RBP13.92□□□□□ -0.18
PNKP-213ENST00000599543 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms