RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 CD69Q07108 199 aa12.13□□□□□ -0.47
SYMPK-213ENST00000599460 HIST1H2BAQ96A08 127 aa12.13□□□□□ -0.47
SYMPK-213ENST00000599460 NBASA2RRP1 2371 aa12.13□□□□□ -0.47
SYMPK-213ENST00000599460 IGKV1-5P01602 117 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 LINC00205P59089 165 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 PRSS8Q16651 343 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 MOB4Q9Y3A3 225 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 MUC6Q6W4X9 2439 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 GATA4P43694 442 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 SYT8Q8NBV8 401 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 Q8TCH9 128 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 LOC389332A0A1B0GUA5 103 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 WFDC1Q9HC57 220 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.12□□□□□ -0.47
SYMPK-213ENST00000599460 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 AGAP20933 346 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 TSPOP30536 169 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 CYB5R2Q6BCY4 276 aa12.12□□□□□ -0.47
SYMPK-213ENST00000599460 NPFFO15130 113 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 ZNF257Q9Y2Q1 563 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 OOSP1A8MZH6 123 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 SLC25A16P16260 332 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 RPS20P60866 119 aaKnown RBP12.11□□□□□ -0.47
SYMPK-213ENST00000599460 RRN3P1Q2M238 152 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 SFRP2Q96HF1 295 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 PHLDA3Q9Y5J5 127 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 DMRT1Q9Y5R6 373 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 ZNF106Q9H2Y7 1883 aaKnown RBP12.11□□□□□ -0.47
SYMPK-213ENST00000599460 TGIF2-C20orf24A0A0A6YYL0 155 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 TCRBV4S1A1TA0A5B7 111 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 ATP5G3P48201 142 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 NMSQ5H8A3 153 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 DCAF16Q9NXF7 216 aa12.11□□□□□ -0.47
SYMPK-213ENST00000599460 ZNF318Q5VUA4 2279 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
SYMPK-213ENST00000599460 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 PVRIGQ6DKI7 326 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 C1orf147Q96MC9 270 aaPredicted RBP12.1□□□□□ -0.47
SYMPK-213ENST00000599460 SCO2A0A1W2PP80 73 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 SAPCD1Q5SSQ6 148 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 RNF125Q96EQ8 232 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 TRAV41A0A0B4J266 112 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 LMO1P25800 156 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 ELOBQ15370 118 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 LEMD1Q68G75 181 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 Q6ZN92 141 aa12.1□□□□□ -0.47
SYMPK-213ENST00000599460 RNF5Q99942 180 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 MAP1LC3CQ9BXW4 147 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 PEX7O00628 323 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 CD99P14209 185 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 H3BUX3 64 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 MT-ND6P03923 174 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 TMEM97Q5BJF2 176 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 MBNL3Q9NUK0 354 aaKnown RBP12.09□□□□□ -0.47
SYMPK-213ENST00000599460 NDUFS8O00217 210 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 TRGC2P03986 189 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 LINC01356Q8N9X3 169 aa12.09□□□□□ -0.47
SYMPK-213ENST00000599460 IGKV1-6A0A0C4DH72 117 aa12.08□□□□□ -0.47
SYMPK-213ENST00000599460 TMEM167AQ8TBQ9 72 aa12.08□□□□□ -0.47
SYMPK-213ENST00000599460 Q9H3A6 140 aa12.08□□□□□ -0.47
SYMPK-213ENST00000599460 MYOD1P15172 320 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 EFNB3Q15768 340 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 DUX4L9Q6RFH8 374 aaPredicted RBP12.08□□□□□ -0.48
SYMPK-213ENST00000599460 OR1P1Q8NH06 330 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 CKS2P33552 79 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 IGLV3-9A0A075B6K5 115 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 PEMTQ9UBM1 199 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 GCGP01275 180 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 SRP19P09132 144 aaKnown RBP12.08□□□□□ -0.48
SYMPK-213ENST00000599460 ZNRD1Q9P1U0 126 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
SYMPK-213ENST00000599460 TBL2Q9Y4P3 447 aaKnown RBP12.08□□□□□ -0.48
SYMPK-213ENST00000599460 KIAA1549LQ6ZVL6 1849 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 PRTN3P24158 256 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 RELBQ01201 579 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 C2orf83Q53S99 150 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 ZNF600Q6ZNG1 722 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 OR8A1Q8NGG7 326 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 GCSAMLQ5JQS6 135 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 MYOZ3Q8TDC0 251 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 VENTXO95231 258 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 HLA-DQA1P01909 254 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 ERVK11-1P61568 191 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 FAM159AQ6UWV7 190 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 PKDREJQ9NTG1 2253 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 IGLV3-1P01715 115 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
SYMPK-213ENST00000599460 DDTP30046 118 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 C5orf64Q2M2E5 130 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 C11orf44Q8N8P7 122 aa12.07□□□□□ -0.48
SYMPK-213ENST00000599460 MRPL18Q9H0U6 180 aaKnown RBP12.07□□□□□ -0.48
SYMPK-213ENST00000599460 CXorf65A6NEN9 183 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 HSPB8Q9UJY1 196 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 SAA4P35542 130 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 ITLN2Q8WWU7 325 aaPredicted RBP12.06□□□□□ -0.48
SYMPK-213ENST00000599460 DOCK7Q96N67 2140 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms