RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 PARD6GQ9BYG4 376 aaPredicted RBP11.45□□□□□ -0.58
VRK3-212ENST00000596814 WDR61Q9GZS3 305 aaKnown RBP11.45□□□□□ -0.58
VRK3-212ENST00000596814 SERTAD4Q9NUC0 356 aa11.45□□□□□ -0.58
VRK3-212ENST00000596814 PSMB11A5LHX3 300 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 NDUFB8O95169 186 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 BRI3O95415 125 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 IGLV1-40P01703 118 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 TRGV3P03979 118 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 FGF7P21781 194 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 TPPP2P59282 170 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 ACSM6Q6P461 480 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 ZNF329Q86UD4 541 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 BAP18Q8IXM2 172 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 NECAP1Q8NC96 275 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
VRK3-212ENST00000596814 WDR83OSQ9Y284 106 aa11.44□□□□□ -0.58
VRK3-212ENST00000596814 MFSD2BA6NFX1 497 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 FAM223BA6NKX1 122 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 IGHG4P01861 327 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 PF4V1P10720 104 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 RND2P52198 227 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 C15orf32Q32M92 178 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 TMEM144Q7Z5S9 345 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 FAM223AQ8IWN6 122 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 SCARB1Q8WTV0 552 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 GINS3Q9BRX5 216 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 ARV1Q9H2C2 271 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 SLA2Q9H6Q3 261 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 MPDU1O75352 247 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 MDKP21741 143 aaPredicted RBP11.43□□□□□ -0.58
VRK3-212ENST00000596814 RUNX1Q01196 453 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 TEPPQ6URK8 271 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 BTNL8Q6UX41 500 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 TMEM116Q8NCL8 245 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 VN1R17PQ8TDU5 208 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 NPIPB3Q92617 1050 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 C16orf95Q9H693 158 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 C21orf62Q9NYP8 219 aa11.43□□□□□ -0.58
VRK3-212ENST00000596814 LSM4Q9Y4Z0 139 aaKnown RBP11.43□□□□□ -0.58
VRK3-212ENST00000596814 TEP1Q99973 2627 aaKnown RBP11.42□□□□□ -0.58
VRK3-212ENST00000596814 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 NDUFA7O95182 113 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 ATP6V0CP27449 155 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 PSMB8P28062 276 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 TEX38Q6PEX7 206 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 C10orf99Q6UWK7 81 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 OR4X1Q8NH49 305 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 CXorf58Q96LI9 332 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 RSG1Q9BU20 258 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 S4R3C0 116 aa11.42□□□□□ -0.58
VRK3-212ENST00000596814 CFDP00746 253 aaPredicted RBP11.41□□□□□ -0.58
VRK3-212ENST00000596814 MFAP4P55083 255 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 SRSF2Q01130 221 aaKnown RBP11.41□□□□□ -0.58
VRK3-212ENST00000596814 ATP5G2Q06055 141 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 CENPVQ7Z7K6 275 aaPredicted RBP11.41□□□□□ -0.58
VRK3-212ENST00000596814 THAP8Q8NA92 274 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 EEF1AKMT3Q96AZ1 226 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 GNPNAT1Q96EK6 184 aaPredicted RBP11.41□□□□□ -0.58
VRK3-212ENST00000596814 MGST2Q99735 147 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 NPCDR1Q9BY65 106 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 SH3BGRL3Q9H299 93 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 NF1P21359 2839 aa11.41□□□□□ -0.58
VRK3-212ENST00000596814 IGKV1OR2-108A0A075B7D4 117 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 ZFP92A6NM28 416 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 IGHV3-23P01764 117 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 ELANEP08246 267 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 NPBWR1P48145 328 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 RAB9AP51151 201 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 FOXE3Q13461 319 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 RAB31Q13636 194 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 EIF5AL1Q6IS14 154 aaKnown RBP11.4□□□□□ -0.58
VRK3-212ENST00000596814 TEX261Q6UWH6 196 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 LCNL1Q6ZST4 164 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 ZNF709Q8N972 641 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 PHYHIPLQ96FC7 376 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 SLC25A32Q9H2D1 315 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 C17orf112F2Z3M2 114 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 AGPAT2O15120 278 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 CLN5O75503 358 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 SPP1P10451 314 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 FCGR2BP31994 310 aaPredicted RBP11.4□□□□□ -0.58
VRK3-212ENST00000596814 CAMLGP49069 296 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 Q56UQ5 140 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 COMMD1Q8N668 190 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 KLHDC1Q8N7A1 406 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 OR4F5Q8NH21 305 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 LINC01006Q8NI28 216 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 ZNF502Q8TBZ5 544 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 TMED6Q8WW62 240 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 PSMG3Q9BT73 122 aaPredicted RBP11.4□□□□□ -0.58
VRK3-212ENST00000596814 GGTLC1Q9BX51 225 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 TIMM9Q9Y5J7 89 aa11.4□□□□□ -0.58
VRK3-212ENST00000596814 A0A0G2JLM5 398 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 GNG7O60262 68 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 SEC11BP0C7V7 166 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 IGLC1P0CG04 106 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 OR10J1P30954 320 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 IFITM2Q01629 132 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms