RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 PQLC2Q6ZP29 291 aa18.24■□□□□ 0.51
SRRM1-222ENST00000596378 EAF1Q96JC9 268 aaPredicted RBP18.24■□□□□ 0.51
SRRM1-222ENST00000596378 PACRGQ96M98 296 aaPredicted RBP18.24■□□□□ 0.51
SRRM1-222ENST00000596378 SLC25A2Q9BXI2 301 aa18.24■□□□□ 0.51
SRRM1-222ENST00000596378 IGKV1D-37A0A075B6S9 117 aa18.24■□□□□ 0.51
SRRM1-222ENST00000596378 C8orf88P0DMB2 117 aa18.24■□□□□ 0.51
SRRM1-222ENST00000596378 LCN2P80188 198 aa18.24■□□□□ 0.51
SRRM1-222ENST00000596378 ADORA2A-AS1P86434 159 aa18.24■□□□□ 0.51
SRRM1-222ENST00000596378 RNASEH2CQ8TDP1 164 aaKnown RBP18.24■□□□□ 0.51
SRRM1-222ENST00000596378 TAS2R45P59539 299 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 FOXL1Q12952 345 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 TNXAQ16473 311 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 FBXL19-AS1Q494R0 122 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 PNKDQ8N490 385 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 FAM167A-AS1Q96KT0 104 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 ARHGAP32A7KAX9 2087 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 PPIAL4CA0A0B4J2A2 164 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 PPIAL4GP0DN37 164 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 RPL15P61313 204 aaKnown RBP18.23■□□□□ 0.51
SRRM1-222ENST00000596378 SUMO1P63165 101 aaKnown RBP18.23■□□□□ 0.51
SRRM1-222ENST00000596378 CENPWQ5EE01 88 aa18.23■□□□□ 0.51
SRRM1-222ENST00000596378 IGLC7A0M8Q6 106 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 C9JCJ5 164 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 SNRPCP09234 159 aaKnown RBP18.22■□□□□ 0.51
SRRM1-222ENST00000596378 LGALS7P47929 136 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 SUB1P53999 127 aaKnown RBP eCLIP18.22■□□□□ 0.51
SRRM1-222ENST00000596378 MFAP2P55001 183 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 C19orf24Q9BVV8 132 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 CLEC7AQ9BXN2 247 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 DNAJC4Q9NNZ3 241 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 IGHV3-21A0A0B4J1V1 117 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 IGHV1-3A0A0C4DH29 117 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 BUB1B-PAK6H3BSN5 160 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 PYYP10082 97 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 CTAG1AP78358 180 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 PATE2Q6UY27 113 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 OR5AU1Q8NGC0 362 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 MISP3Q96FF7 219 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 IMMP2LQ96T52 175 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 INSIG2Q9Y5U4 225 aa18.22■□□□□ 0.51
SRRM1-222ENST00000596378 COL6A6A6NMZ7 2263 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 HELTA6NFD8 242 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 COX7A2P2O60397 106 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 PRRX1P54821 245 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 TRAPPC1Q9Y5R8 145 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 TCRBV4S1A1TA0A5B7 111 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 MOSP00540 346 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 GNG4P50150 75 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 UBE2L3P68036 154 aaKnown RBP18.21■□□□□ 0.51
SRRM1-222ENST00000596378 KLRB1Q12918 225 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 LHFPL4Q7Z7J7 247 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 ST6GALNAC3Q8NDV1 305 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 ZNF355PQ9NSJ1 428 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 ARL2-SNX15V9GYD0 113 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 CSMD1Q96PZ7 3565 aa18.21■□□□□ 0.51
SRRM1-222ENST00000596378 AMBPP02760 352 aa18.2■□□□□ 0.5
SRRM1-222ENST00000596378 MRPL32Q9BYC8 188 aaKnown RBP18.2■□□□□ 0.5
SRRM1-222ENST00000596378 C10orf113Q5VZT2 155 aa18.2■□□□□ 0.5
SRRM1-222ENST00000596378 IGFBPL1Q8WX77 278 aa18.2■□□□□ 0.5
SRRM1-222ENST00000596378 TNFRSF14Q92956 283 aa18.2■□□□□ 0.5
SRRM1-222ENST00000596378 ONECUT1Q9UBC0 465 aa18.2■□□□□ 0.5
SRRM1-222ENST00000596378 C22orf46C9J442 243 aa18.19■□□□□ 0.5
SRRM1-222ENST00000596378 CRYGBP07316 175 aa18.19■□□□□ 0.5
SRRM1-222ENST00000596378 RPL27AP46776 148 aaKnown RBP18.19■□□□□ 0.5
SRRM1-222ENST00000596378 TEX45Q8NA69 505 aa18.19■□□□□ 0.5
SRRM1-222ENST00000596378 SIGLEC9Q9Y336 463 aa18.19■□□□□ 0.5
SRRM1-222ENST00000596378 ERVFC1-1P60608 527 aa18.18■□□□□ 0.5
SRRM1-222ENST00000596378 NHLH1Q02575 133 aa18.18■□□□□ 0.5
SRRM1-222ENST00000596378 MMD2Q8IY49 270 aa18.18■□□□□ 0.5
SRRM1-222ENST00000596378 A0A1B0GUS0 222 aa18.18■□□□□ 0.5
SRRM1-222ENST00000596378 UCNP55089 124 aa18.18■□□□□ 0.5
SRRM1-222ENST00000596378 COA6Q5JTJ3 125 aaKnown RBP18.18■□□□□ 0.5
SRRM1-222ENST00000596378 THAP8Q8NA92 274 aa18.18■□□□□ 0.5
SRRM1-222ENST00000596378 LDLRAD2Q5SZI1 272 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 RPEQ96AT9 228 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 RNASE7Q9H1E1 156 aaKnown RBP18.17■□□□□ 0.5
SRRM1-222ENST00000596378 FBXL15Q9H469 300 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 IL36BQ9NZH7 164 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 A0A1W2PRE2 83 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 FRMD6-AS1P0C7T7 363 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 CNN1P51911 297 aaKnown RBP18.17■□□□□ 0.5
SRRM1-222ENST00000596378 OR8B3Q8NGG8 313 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 LINC00479Q96M42 142 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 OR8B2Q96RD0 313 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 CHODLQ9H9P2 273 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 LY96Q9Y6Y9 160 aa18.17■□□□□ 0.5
SRRM1-222ENST00000596378 ASPHD1Q5U4P2 390 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 BEND2Q8NDZ0 799 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 V9GYV3 84 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 CHD8Q9HCK8 2581 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 COMPP49747 757 aaPredicted RBP18.16■□□□□ 0.5
SRRM1-222ENST00000596378 PDLIM4P50479 330 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 NHLRC2Q8NBF2 726 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 PFDN5Q99471 154 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 PAXXQ9BUH6 204 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 GSX1Q9H4S2 264 aaPredicted RBP18.16■□□□□ 0.5
SRRM1-222ENST00000596378 DMRT1Q9Y5R6 373 aa18.16■□□□□ 0.5
SRRM1-222ENST00000596378 ABCA1O95477 2261 aa18.15■□□□□ 0.5
SRRM1-222ENST00000596378 FCN1O00602 326 aa18.15■□□□□ 0.5
SRRM1-222ENST00000596378 FSTL3O95633 263 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms