RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 A0A1W2PS18 150 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 M0R2N4 97 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 P0C879 139 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 P0DMU3 169 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 FAM231AP0DMU4 169 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 FAM231CP0DMU5 169 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 NPPCP23582 126 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 HRH1P35367 487 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 P2RY1P47900 373 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 PPP5CP53041 499 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 LGALS9BQ3B8N2 356 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 SPINK9Q5DT21 86 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 ACTL10Q5JWF8 245 aa7.16□□□□□ -1.26
LIG1-209ENST00000596104 S100A16Q96FQ6 103 aaKnown RBP7.16□□□□□ -1.26
LIG1-209ENST00000596104 FNDC4Q9H6D8 234 aaPredicted RBP7.16□□□□□ -1.26
LIG1-209ENST00000596104 CLN5O75503 358 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 IGKV1-17P01599 117 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 IGKV1-5P01602 117 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 RNASE2P10153 161 aaKnown RBP7.15□□□□□ -1.26
LIG1-209ENST00000596104 HLA-DMAP28067 261 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 UCP3P55916 312 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 TMEM69Q5SWH9 247 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 LPCAT3Q6P1A2 487 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 CENPSQ8N2Z9 138 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 METTL26Q96S19 204 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 RAB40CQ96S21 281 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 NDUFAF3Q9BU61 184 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 U3KQE9 123 aa7.15□□□□□ -1.26
LIG1-209ENST00000596104 A0A0B4J293 547 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 CORTO00230 105 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 CD74P04233 296 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 S100GP29377 79 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 PRSS3P35030 304 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 SNCAP37840 140 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 MLANAQ16655 118 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 KCTD21Q4G0X4 260 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 UBE2NLQ5JXB2 153 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 Q6ZR54 194 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 OR4X1Q8NH49 305 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 GPX8Q8TED1 209 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 GLMPQ8WWB7 406 aa7.14□□□□□ -1.27
LIG1-209ENST00000596104 TGFBR1P36897 503 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 RPL5P46777 297 aaKnown RBP7.13□□□□□ -1.27
LIG1-209ENST00000596104 TSPAN5P62079 268 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 BSXQ3C1V8 233 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 PSMG4Q5JS54 123 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 ZNF575Q86XF7 245 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 SLC35G3Q8N808 338 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 SAMD12Q8N8I0 201 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 TMEM230Q96A57 120 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 YTHDF1Q9BYJ9 559 aaKnown RBP7.13□□□□□ -1.27
LIG1-209ENST00000596104 XCL2Q9UBD3 114 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 ABCA13Q86UQ4 5058 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 PKD1P98161 4303 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 AGRNO00468 2067 aa7.13□□□□□ -1.27
LIG1-209ENST00000596104 HELTA6NFD8 242 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 ZNF705FA8MVS1 300 aaPredicted RBP7.12□□□□□ -1.27
LIG1-209ENST00000596104 H3BMM0 161 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 IFNA17P01571 189 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 ZNF705DP0CH99 300 aaPredicted RBP7.12□□□□□ -1.27
LIG1-209ENST00000596104 ZNF705BP0CI00 300 aaPredicted RBP7.12□□□□□ -1.27
LIG1-209ENST00000596104 NPY1RP25929 384 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 OPRK1P41145 380 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 ETV6P41212 452 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 SUB1P53999 127 aaKnown RBP eCLIP7.12□□□□□ -1.27
LIG1-209ENST00000596104 RND3P61587 244 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 DHRS2Q13268 280 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 TIGITQ495A1 244 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 C16orf54Q6UWD8 224 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 ZNF705AQ6ZN79 300 aaPredicted RBP7.12□□□□□ -1.27
LIG1-209ENST00000596104 Q6ZRM9 215 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 CROCCP3Q8IVE0 287 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 NARS2Q96I59 477 aaKnown RBP7.12□□□□□ -1.27
LIG1-209ENST00000596104 TP53RKQ96S44 253 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 NEU1Q99519 415 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 C1QTNF4Q9BXJ3 329 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 MUC4Q99102 2169 aa7.12□□□□□ -1.27
LIG1-209ENST00000596104 IGLV2-18A0A075B6J9 118 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 A0A0G2JRQ6 117 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 FAM90A26D6RGX4 464 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 IGLC1P0CG04 106 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 RCVRNP35243 200 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 RPS19P39019 145 aaKnown RBP7.11□□□□□ -1.27
LIG1-209ENST00000596104 HOXA1P49639 335 aaPredicted RBP7.11□□□□□ -1.27
LIG1-209ENST00000596104 EIF2B2P49770 351 aaKnown RBP7.11□□□□□ -1.27
LIG1-209ENST00000596104 AKR1C2P52895 323 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 NUTF2P61970 127 aaKnown RBP7.11□□□□□ -1.27
LIG1-209ENST00000596104 NEDD8Q15843 81 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 FAM210BQ96KR6 192 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 SCPEP1Q9HB40 452 aa7.11□□□□□ -1.27
LIG1-209ENST00000596104 SEPSECSQ9HD40 501 aaKnown RBP7.11□□□□□ -1.27
LIG1-209ENST00000596104 TRAV30A0A087WSZ9 112 aa7.1□□□□□ -1.27
LIG1-209ENST00000596104 M0QYG6 137 aa7.1□□□□□ -1.27
LIG1-209ENST00000596104 SCGB2A1O75556 95 aa7.1□□□□□ -1.27
LIG1-209ENST00000596104 IFNA10P01566 189 aa7.1□□□□□ -1.27
LIG1-209ENST00000596104 HNRNPCP07910 306 aaKnown RBP eCLIP7.1□□□□□ -1.27
LIG1-209ENST00000596104 SPART-AS1P0CW21 52 aa7.1□□□□□ -1.27
LIG1-209ENST00000596104 HLA-DRB4P13762 266 aa7.1□□□□□ -1.27
LIG1-209ENST00000596104 PI3P19957 117 aa7.1□□□□□ -1.27
LIG1-209ENST00000596104 AP2S1P53680 142 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms