RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 K7ERS5 55 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 SLC22A1O15245 554 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 IGHV1-46P01743 117 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 IFNA4P05014 189 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 LINC00694P0DN24 101 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 NPPCP23582 126 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 GNB2P62879 340 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 ZNF141Q15928 474 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 SCIMPQ6UWF3 145 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 AMTNQ6UX39 209 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 SPATA12Q7Z6I5 190 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 CROCCP2Q86T23 111 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 MSRB3Q8IXL7 192 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 Q8N9W7 124 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 LINC01560Q8TB33 94 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 STAG3L4Q8TBR4 150 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 SLC25A46Q96AG3 418 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 TBL1YQ9BQ87 522 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 CKLFQ9UBR5 152 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 NAT8Q9UHE5 227 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 CAMSAP2Q08AD1 1489 aa3.13□□□□□ -1.91
SOX2-OT-219ENST00000593330 SPATA31E1Q6ZUB1 1445 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 IGKV1-9A0A0C4DH69 117 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 A0A1W2PP18 115 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 C11orf94C9JXX5 98 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 OR2T1O43869 369 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 LYZL6O75951 148 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 MT-ND4LP03901 98 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 IGLC6P0CF74 106 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 CCL3P10147 92 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 NTF3P20783 257 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 ZNF181Q2M3W8 571 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 TMEM69Q5SWH9 247 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 TMEM244Q5VVB8 128 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 C16orf47Q6ZP98 133 aaPredicted RBP3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 ZNF695Q8IW36 515 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 OR2T10Q8NGZ9 312 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 ZNF418Q8TF45 676 aaPredicted RBP3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 PPP3R2Q96LZ3 170 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 UPK3BQ9BT76 320 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 ZNF222Q9UK12 451 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 TICRRQ7Z2Z1 1910 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 PHLPP1O60346 1717 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 NISCHQ9Y2I1 1504 aa3.12□□□□□ -1.91
SOX2-OT-219ENST00000593330 CRB1P82279 1406 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 ARHGAP23Q9P227 1491 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 IRGMA1A4Y4 181 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 LEUTXA8MZ59 168 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 CORTO00230 105 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 NDUFB2O95178 105 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 IGKV1D-33P01593 117 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 IGKV1-33P01594 117 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 MUC1P15941 1255 aaPredicted RBP3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 CSN1S1P47710 185 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 AKR1C2P52895 323 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 GNG2P59768 71 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 IGLV3-21P80748 117 aaPredicted RBP3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 CCSMST1Q4G0I0 132 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 PHF5AQ7RTV0 110 aaKnown RBP3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 C3orf22Q8N5N4 141 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 OR51A4Q8NGJ6 313 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 PDCD10Q9BUL8 212 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 ZNF471Q9BX82 626 aaPredicted RBP3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 GABARAPL1Q9H0R8 117 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 LINC00574Q9H8X3 128 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 CBLN4Q9NTU7 201 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 FAIMQ9NVQ4 179 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 MCTS1Q9ULC4 181 aaKnown RBP3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 TMEM14AQ9Y6G1 99 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 NLRC5Q86WI3 1866 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 NUP210Q8TEM1 1887 aaPredicted RBP3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 DENND4CQ5VZ89 1909 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 OTOFQ9HC10 1997 aa3.11□□□□□ -1.91
SOX2-OT-219ENST00000593330 DISP2A7MBM2 1401 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 PTPRTO14522 1441 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 ARHGAP31Q2M1Z3 1444 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 TRAPPC8Q9Y2L5 1435 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 LTBP1Q14766 1721 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 IGHV1-58A0A0C4DH39 117 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 ODAMA1E959 279 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 TMEM212A6NML5 194 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 TMEM256-PLSCR3K7ERE1 68 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 LECT2O14960 151 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 C1QAP02745 245 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 TRGV3P03979 118 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 GPX1P07203 203 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 RNASE4P34096 147 aaKnown RBP3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 TMBIM6P55061 237 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 MRPS10P82664 201 aaKnown RBP3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 C10orf91Q5T1B1 145 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 C10orf126Q8N4M7 172 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 C11orf42Q8N5U0 333 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 OR4S1Q8NGB4 309 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 WFDC5Q8TCV5 224 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 ZNF355PQ9NSJ1 428 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 LRP4O75096 1905 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 UBR2Q8IWV8 1755 aa3.1□□□□□ -1.91
SOX2-OT-219ENST00000593330 FAM135BQ49AJ0 1406 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms