RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 KLK9Q2XQG4 91 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 C9orf152Q5JTZ5 239 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 ZNF709Q8N972 641 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 VSIRQ9H7M9 311 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 KLK9Q9UKQ9 250 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 AGPAT2O15120 278 aa20.43■□□□□ 0.86
SCAMP4-210ENST00000588555 AKR1C8PQ5T2L2 129 aa20.43■□□□□ 0.86
SCAMP4-210ENST00000588555 ACSM6Q6P461 480 aa20.43■□□□□ 0.86
SCAMP4-210ENST00000588555 TMEM116Q8NCL8 245 aa20.43■□□□□ 0.86
SCAMP4-210ENST00000588555 MTORP42345 2549 aa20.42■□□□□ 0.86
SCAMP4-210ENST00000588555 IGHV3-21A0A0B4J1V1 117 aa20.42■□□□□ 0.86
SCAMP4-210ENST00000588555 HNF1AP20823 631 aa20.42■□□□□ 0.86
SCAMP4-210ENST00000588555 Q6ZRG5 221 aa20.42■□□□□ 0.86
SCAMP4-210ENST00000588555 SLC35E3Q7Z769 313 aa20.42■□□□□ 0.86
SCAMP4-210ENST00000588555 NPIPB3Q92617 1050 aa20.42■□□□□ 0.86
SCAMP4-210ENST00000588555 HIVEP1P15822 2718 aa20.42■□□□□ 0.86
SCAMP4-210ENST00000588555 RND2P52198 227 aa20.41■□□□□ 0.86
SCAMP4-210ENST00000588555 THAP8Q8NA92 274 aa20.41■□□□□ 0.86
SCAMP4-210ENST00000588555 RPRMQ9NS64 109 aa20.41■□□□□ 0.86
SCAMP4-210ENST00000588555 ELLP55199 621 aaPredicted RBP20.41■□□□□ 0.86
SCAMP4-210ENST00000588555 PXDC1Q5TGL8 231 aa20.41■□□□□ 0.86
SCAMP4-210ENST00000588555 SETXQ7Z333 2677 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-210ENST00000588555 IGKV1D-37A0A075B6S9 117 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 TRAV41A0A0B4J266 112 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 TSPAN9O75954 239 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 LY6G6DO95868 133 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 BLOC1S1P78537 153 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 RAB31Q13636 194 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 FFAR4Q5NUL3 377 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 MIC13Q5XKP0 118 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 FAM213BQ8TBF2 198 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 SLC45A2Q9UMX9 530 aa20.4■□□□□ 0.86
SCAMP4-210ENST00000588555 SOX15O60248 233 aa20.39■□□□□ 0.86
SCAMP4-210ENST00000588555 RPL29P47914 159 aaKnown RBP20.39■□□□□ 0.86
SCAMP4-210ENST00000588555 LINC00527Q9UJ94 153 aa20.39■□□□□ 0.86
SCAMP4-210ENST00000588555 PXMP4Q9Y6I8 212 aa20.39■□□□□ 0.86
SCAMP4-210ENST00000588555 CYB5BO43169 146 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 OR10J1P30954 320 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 PRR20EP86478 221 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 PRR20CP86479 221 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 PRR20DP86480 221 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 PRR20BP86481 221 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 PRR20AP86496 221 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 TMEM41BQ5BJD5 291 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 DPPA3Q6W0C5 159 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 LYPD6BQ8NI32 183 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 MED9Q9NWA0 146 aa20.39■□□□□ 0.85
SCAMP4-210ENST00000588555 YIF1AO95070 293 aa20.38■□□□□ 0.85
SCAMP4-210ENST00000588555 RAB2AP61019 212 aa20.38■□□□□ 0.85
SCAMP4-210ENST00000588555 TMEM86BQ8N661 226 aa20.38■□□□□ 0.85
SCAMP4-210ENST00000588555 KCNIP2Q9NS61 270 aa20.38■□□□□ 0.85
SCAMP4-210ENST00000588555 HIVEP2P31629 2446 aa20.37■□□□□ 0.85
SCAMP4-210ENST00000588555 TRBV9A0A0B4J1U6 114 aa20.37■□□□□ 0.85
SCAMP4-210ENST00000588555 STPG3Q8N7X2 389 aa20.37■□□□□ 0.85
SCAMP4-210ENST00000588555 OR4X1Q8NH49 305 aa20.37■□□□□ 0.85
SCAMP4-210ENST00000588555 NDUFB8O95169 186 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 LINC00869P0C866 280 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 HIST1H1BP16401 226 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 ZNF616Q08AN1 781 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 RPP25LQ8N5L8 163 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 NOL4LQ96MY1 436 aaPredicted RBP20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 THYN1Q9P016 225 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 ZNF580Q9UK33 172 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 TEX46H3BTG2 121 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 AP4M1O00189 453 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 OR2J3O76001 311 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 TSPAN15O95858 294 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 MBP02144 154 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 B2MP61769 119 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 ZNF726P1Q15940 193 aa20.36■□□□□ 0.85
SCAMP4-210ENST00000588555 M6PRP20645 277 aa20.35■□□□□ 0.85
SCAMP4-210ENST00000588555 PPIFP30405 207 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-210ENST00000588555 GCSAMLQ5JQS6 135 aa20.35■□□□□ 0.85
SCAMP4-210ENST00000588555 BPIFCQ8NFQ6 507 aa20.35■□□□□ 0.85
SCAMP4-210ENST00000588555 DUX5Q96PT3 197 aa20.35■□□□□ 0.85
SCAMP4-210ENST00000588555 SLC39A9Q9NUM3 307 aa20.35■□□□□ 0.85
SCAMP4-210ENST00000588555 TCRBV4S1A1TA0A5B7 111 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 MFSD2BA6NFX1 497 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 DEFA5Q01523 94 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 CYP2G1PQ6ZSU1 146 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 RCC1LQ96I51 464 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 HRH4Q9H3N8 390 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 FBXL7Q9UJT9 491 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 ZFP92A6NM28 416 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 FOSL1P15407 271 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 GATA2P23769 480 aaPredicted RBP20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 ZNF90Q03938 601 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 ACOT6Q3I5F7 207 aaPredicted RBP20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 SSX7Q7RTT5 188 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 COMMD7Q86VX2 200 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 OR10G4Q8NGN3 311 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 OR10G9Q8NGN4 311 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 OR10G7Q8NGN6 311 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 TRGV9Q99603 122 aa20.34■□□□□ 0.85
SCAMP4-210ENST00000588555 ATP6V1G1O75348 118 aa20.33■□□□□ 0.84
SCAMP4-210ENST00000588555 IGLC1P0CG04 106 aa20.33■□□□□ 0.84
SCAMP4-210ENST00000588555 CD99P14209 185 aa20.33■□□□□ 0.84
SCAMP4-210ENST00000588555 RBMS3Q6XE24 437 aaKnown RBP20.33■□□□□ 0.84
SCAMP4-210ENST00000588555 GSX1Q9H4S2 264 aaPredicted RBP20.33■□□□□ 0.84
SCAMP4-210ENST00000588555 NSD1Q96L73 2696 aaPredicted RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms