RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 IFT46Q9NQC8 304 aa10.9□□□□□ -0.66
IFT20-216ENST00000588477 DIABLOQ9NR28 239 aa10.9□□□□□ -0.66
IFT20-216ENST00000588477 GPR31O00270 319 aa10.89□□□□□ -0.67
IFT20-216ENST00000588477 PMP2P02689 132 aa10.89□□□□□ -0.67
IFT20-216ENST00000588477 MXD1Q05195 221 aa10.89□□□□□ -0.67
IFT20-216ENST00000588477 TMEM230Q96A57 120 aa10.89□□□□□ -0.67
IFT20-216ENST00000588477 NARS2Q96I59 477 aaKnown RBP10.89□□□□□ -0.67
IFT20-216ENST00000588477 FAM210BQ96KR6 192 aa10.89□□□□□ -0.67
IFT20-216ENST00000588477 FXYD6Q9H0Q3 95 aa10.89□□□□□ -0.67
IFT20-216ENST00000588477 A0A0A6YYH2 397 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 HELTA6NFD8 242 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 A6NJ64 397 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 IGKV1-39P01597 117 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 IGKV1D-39P04432 117 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 CLEC2LP0C7M8 214 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 SDC2P34741 201 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 SNCAP37840 140 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 SCAND1P57086 179 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 TNP2Q05952 138 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 PHLDA2Q53GA4 152 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 IDNKQ5T6J7 187 aa10.88□□□□□ -0.67
IFT20-216ENST00000588477 EIF2B2P49770 351 aaKnown RBP10.87□□□□□ -0.67
IFT20-216ENST00000588477 MLANAQ16655 118 aa10.87□□□□□ -0.67
IFT20-216ENST00000588477 KCTD21Q4G0X4 260 aa10.87□□□□□ -0.67
IFT20-216ENST00000588477 NRG4Q8WWG1 115 aa10.87□□□□□ -0.67
IFT20-216ENST00000588477 MRPL36Q9P0J6 103 aaKnown RBP10.87□□□□□ -0.67
IFT20-216ENST00000588477 SSR3Q9UNL2 185 aa10.87□□□□□ -0.67
IFT20-216ENST00000588477 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 TMEM189A5PLL7 270 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 CLN5O75503 358 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 HTN3P15516 51 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 IZUMO4Q1ZYL8 232 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 ZNF705AQ6ZN79 300 aaPredicted RBP10.86□□□□□ -0.67
IFT20-216ENST00000588477 TBC1D26Q86UD7 250 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 Q8N1X5 172 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 OR5H2Q8NGV7 314 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 OR6F1Q8NGZ6 308 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 MRGPRFQ96AM1 343 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 NEU1Q99519 415 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 NIPSNAP3BQ9BS92 247 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 FAM212BQ9NTI7 297 aaPredicted RBP10.86□□□□□ -0.67
IFT20-216ENST00000588477 BLOC1S6Q9UL45 172 aa10.86□□□□□ -0.67
IFT20-216ENST00000588477 H3BMM0 161 aa10.85□□□□□ -0.67
IFT20-216ENST00000588477 PSMB9P28065 219 aa10.85□□□□□ -0.67
IFT20-216ENST00000588477 AP2S1P53680 142 aaPredicted RBP10.85□□□□□ -0.67
IFT20-216ENST00000588477 CNBD2Q96M20 576 aa10.85□□□□□ -0.67
IFT20-216ENST00000588477 FNDC4Q9H6D8 234 aaPredicted RBP10.85□□□□□ -0.67
IFT20-216ENST00000588477 DKK2Q9UBU2 259 aa10.85□□□□□ -0.67
IFT20-216ENST00000588477 SMIM9A6NGZ8 99 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 ZNF705FA8MVS1 300 aaPredicted RBP10.84□□□□□ -0.67
IFT20-216ENST00000588477 CORTO00230 105 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 ZNF705DP0CH99 300 aaPredicted RBP10.84□□□□□ -0.67
IFT20-216ENST00000588477 ZNF705BP0CI00 300 aaPredicted RBP10.84□□□□□ -0.67
IFT20-216ENST00000588477 RNASE2P10153 161 aaKnown RBP10.84□□□□□ -0.67
IFT20-216ENST00000588477 S100GP29377 79 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 OPRK1P41145 380 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 SUB1P53999 127 aaKnown RBP eCLIP10.84□□□□□ -0.67
IFT20-216ENST00000588477 FXYD7P58549 80 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 TAS2R46P59540 309 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
IFT20-216ENST00000588477 TIGITQ495A1 244 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 FAM222AQ5U5X8 452 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 C16orf54Q6UWD8 224 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 SLC35G3Q8N808 338 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 OR4X1Q8NH49 305 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 GLMPQ8WWB7 406 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 RNF167Q9H6Y7 350 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 U3KQE9 123 aa10.84□□□□□ -0.67
IFT20-216ENST00000588477 FAM90A26D6RGX4 464 aa10.83□□□□□ -0.68
IFT20-216ENST00000588477 SCGB2A1O75556 95 aa10.83□□□□□ -0.68
IFT20-216ENST00000588477 HNRNPCP07910 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
IFT20-216ENST00000588477 LPCAT3Q6P1A2 487 aa10.83□□□□□ -0.68
IFT20-216ENST00000588477 ANAPC10Q9UM13 185 aa10.83□□□□□ -0.68
IFT20-216ENST00000588477 RFNGQ9Y644 331 aa10.83□□□□□ -0.68
IFT20-216ENST00000588477 LRP1BQ9NZR2 4599 aa10.83□□□□□ -0.68
IFT20-216ENST00000588477 TEX48A0A1B0GUV7 120 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 INS-IGF2F8WCM5 200 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 IGKV1-17P01599 117 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 IGKV3-20P01619 116 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 NAT1P18440 290 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 HRH1P35367 487 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 TSPAN5P62079 268 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 TMEM88Q6PEY1 159 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 TMED3Q9Y3Q3 217 aa10.82□□□□□ -0.68
IFT20-216ENST00000588477 TRAV30A0A087WSZ9 112 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 HLA-DRB4P13762 266 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 HLA-DMAP28067 261 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 ETV6P41212 452 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 GDF5OSQ5U4N7 250 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 LYSMD2Q8IV50 215 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 S100A16Q96FQ6 103 aaKnown RBP10.81□□□□□ -0.68
IFT20-216ENST00000588477 PDCD10Q9BUL8 212 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 YTHDF1Q9BYJ9 559 aaKnown RBP10.81□□□□□ -0.68
IFT20-216ENST00000588477 NRN1Q9NPD7 142 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 HLA-DRB4X5D2U9 266 aa10.81□□□□□ -0.68
IFT20-216ENST00000588477 A0A0B4J293 547 aa10.8□□□□□ -0.68
IFT20-216ENST00000588477 HOXA1P49639 335 aaPredicted RBP10.8□□□□□ -0.68
IFT20-216ENST00000588477 FAM3BP58499 235 aaPredicted RBP10.8□□□□□ -0.68
IFT20-216ENST00000588477 TAS2R20P59543 309 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms