RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 LINC00588Q9Y4M8 146 aa7.81□□□□□ -1.16
CASC3-208ENST00000583649 HLA-DRB4X5D2U9 266 aa7.81□□□□□ -1.16
CASC3-208ENST00000583649 LYRM9A8MSI8 78 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 CASQ2O14958 399 aaPredicted RBP7.8□□□□□ -1.16
CASC3-208ENST00000583649 KRASP01116 189 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 IGHV3-48P01763 117 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 SNCAP37840 140 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 NKX2-1P43699 371 aaPredicted RBP7.8□□□□□ -1.16
CASC3-208ENST00000583649 SUB1P53999 127 aaKnown RBP eCLIP7.8□□□□□ -1.16
CASC3-208ENST00000583649 XGP55808 180 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 DLK1P80370 383 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 SPHARQ15513 63 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 RNASE12Q5GAN4 147 aaKnown RBP7.8□□□□□ -1.16
CASC3-208ENST00000583649 SPATA31B1PQ5VZV4 182 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 BPIFB6Q8NFQ5 453 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 CYGBQ8WWM9 190 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 TMEM203Q969S6 136 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 PSORS1C1Q9UIG5 152 aa7.8□□□□□ -1.16
CASC3-208ENST00000583649 TRAV30A0A087WSZ9 112 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 TMEM50AO95807 157 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 PPYP01298 95 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 ATP5G1P05496 136 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 F2RP25116 425 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 ID1P41134 155 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 ATP5G3P48201 142 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 CMTM1Q8IZ96 169 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 OR4A16Q8NH70 328 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 GFI1Q99684 422 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 NRN1Q9NPD7 142 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 PFDN2Q9UHV9 154 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 NSG2Q9Y328 171 aa7.79□□□□□ -1.16
CASC3-208ENST00000583649 A0A1B0GU03 582 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 FAM90A26D6RGX4 464 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 M0QYG6 137 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 GSTZ1O43708 216 aaPredicted RBP7.78□□□□□ -1.16
CASC3-208ENST00000583649 IGKV3-20P01619 116 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 S100GP29377 79 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 FXYD4P59646 89 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 HERV-K104P61576 105 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 B2MP61769 119 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 RPS25P62851 125 aaKnown RBP7.78□□□□□ -1.16
CASC3-208ENST00000583649 OR4C16Q8NGL9 310 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 CLUHP3Q96NS8 147 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 SCPEP1Q9HB40 452 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 MDFICQ9P1T7 246 aa7.78□□□□□ -1.16
CASC3-208ENST00000583649 SMR3BP02814 79 aaPredicted RBP7.77□□□□□ -1.17
CASC3-208ENST00000583649 HNRNPCP07910 306 aaKnown RBP eCLIP7.77□□□□□ -1.17
CASC3-208ENST00000583649 DEFB130BP0DP73 79 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 DEFB130AP0DP74 79 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 G6PCP35575 357 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 NUP62P37198 522 aaPredicted RBP7.77□□□□□ -1.17
CASC3-208ENST00000583649 EBLN2Q6P2I7 272 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 C8orf59Q8N0T1 100 aaPredicted RBP7.77□□□□□ -1.17
CASC3-208ENST00000583649 OR4B1Q8NGF8 309 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 COQ8AQ8NI60 647 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 Q8WTZ3 238 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 ACOT13Q9NPJ3 140 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 PLCXD1Q9NUJ7 323 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
CASC3-208ENST00000583649 SRRM2Q9UQ35 2752 aaKnown RBP7.76□□□□□ -1.17
CASC3-208ENST00000583649 MYCBP2O75592 4640 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 IFITM5A6NNB3 132 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
CASC3-208ENST00000583649 CLN5O75503 358 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 HSMCR30P0CW71 290 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 MYL9P24844 172 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 LPAR6P43657 344 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 FXYD7P58549 80 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 PSG9Q00887 426 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 PRCDQ00LT1 54 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 C16orf54Q6UWD8 224 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 SIGLEC15Q6ZMC9 328 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 FOXI2Q6ZQN5 318 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 ZNF818PQ6ZRF7 136 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 H2BFWTQ7Z2G1 175 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 DHRSXQ8N5I4 330 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 BEST4Q8NFU0 473 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 LGALS14Q8TCE9 139 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 NUDCD2Q8WVJ2 157 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 LINC00052Q96N35 136 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 UPK3BQ9BT76 320 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 SAV1Q9H4B6 383 aaPredicted RBP7.76□□□□□ -1.17
CASC3-208ENST00000583649 C8orf4Q9NR00 106 aa7.76□□□□□ -1.17
CASC3-208ENST00000583649 CBY3A6NI87 242 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
CASC3-208ENST00000583649 OPRK1P41145 380 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 PPP5CP53041 499 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 SAMD13Q5VXD3 122 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 TMEM91Q6ZNR0 172 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 NFE4Q86UQ8 179 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 TMEM17Q86X19 198 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 OR6F1Q8NGZ6 308 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 GLMPQ8WWB7 406 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 FCAMRQ8WWV6 532 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 ABHD1Q96SE0 405 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 PDCD10Q9BUL8 212 aa7.75□□□□□ -1.17
CASC3-208ENST00000583649 ELF5Q9UKW6 265 aaPredicted RBP7.75□□□□□ -1.17
CASC3-208ENST00000583649 TMEM235A6NFC5 223 aa7.74□□□□□ -1.17
CASC3-208ENST00000583649 ADAP1O75689 374 aa7.74□□□□□ -1.17
CASC3-208ENST00000583649 RLN1P04808 185 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms