RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 DHRS2Q13268 280 aa15.13■□□□□ 0.01
SS18-218ENST00000581021 C2orf83Q53S99 150 aa15.13■□□□□ 0.01
SS18-218ENST00000581021 C20orf24Q9BUV8 137 aa15.13■□□□□ 0.01
SS18-218ENST00000581021 PALMDQ9NP74 551 aa15.13■□□□□ 0.01
SS18-218ENST00000581021 DAZ1Q9NQZ3 744 aaKnown RBP15.13■□□□□ 0.01
SS18-218ENST00000581021 STAB2Q8WWQ8 2551 aa15.13■□□□□ 0.01
SS18-218ENST00000581021 CORTO00230 105 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 NUPL2O15504 423 aaKnown RBP15.12■□□□□ 0.01
SS18-218ENST00000581021 LYRM1O43325 122 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 GNG7O60262 68 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 CD7P09564 240 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 OPRK1P41145 380 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 LINC00299Q6ZSB3 139 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 SBSPONQ8IVN8 264 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 OR1S1Q8NH92 325 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 MARC2Q969Z3 335 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 CCDC32Q9BV29 185 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 WFDC10AQ9H1F0 79 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 C19orf73Q9NVV2 129 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 GAR1Q9NY12 217 aaKnown RBP15.12■□□□□ 0.01
SS18-218ENST00000581021 TENM3Q9P273 2699 aa15.12■□□□□ 0.01
SS18-218ENST00000581021 CENPXA8MT69 81 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 ADAP1O75689 374 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 TMEM50AO95807 157 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 HOXB5P09067 269 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 OR4E1P0C645 316 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 NPY1RP25929 384 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 GGNBP1Q5YKI7 109 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 DUSP18Q8NEJ0 188 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 DTD1Q8TEA8 209 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 OR10C1Q96KK4 312 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 PTTG2Q9NZH5 202 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 MRPL27Q9P0M9 148 aaKnown RBP15.11■□□□□ 0.01
SS18-218ENST00000581021 TBC1D24Q9ULP9 559 aa15.11■□□□□ 0.01
SS18-218ENST00000581021 C15orf62A8K5M9 175 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 MPTX1A8MV57 137 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 SCAF4O95104 1147 aaKnown RBP15.1■□□□□ 0.01
SS18-218ENST00000581021 CD81P60033 236 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 RELQ04864 619 aaPredicted RBP15.1■□□□□ 0.01
SS18-218ENST00000581021 GUCA2BQ16661 112 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 TOMM20LQ6UXN7 152 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 LYG2Q86SG7 212 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 OR4X1Q8NH49 305 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 C20orf85Q9H1P6 137 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 ZFAND3Q9H8U3 227 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 TMED3Q9Y3Q3 217 aa15.1■□□□□ 0.01
SS18-218ENST00000581021 IGHV3-49A0A0A0MS15 119 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 A8MZ25 164 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 K7EMT4 169 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 CLN5O75503 358 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 IGKV1-17P01599 117 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 SLC25A6P12236 298 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 NPBWR1P48145 328 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 PRSS54Q6PEW0 395 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 GTSCR1Q86UQ5 136 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 OR52B4Q8NGK2 314 aa15.09■□□□□ 0.01
SS18-218ENST00000581021 YIF1AO95070 293 aa15.08■□□□□ 0
SS18-218ENST00000581021 RNASEH2CQ8TDP1 164 aaKnown RBP15.08■□□□□ 0
SS18-218ENST00000581021 NEURL2Q9BR09 285 aa15.08■□□□□ 0
SS18-218ENST00000581021 HIPK2Q9H2X6 1198 aa15.08■□□□□ 0
SS18-218ENST00000581021 CACFD1Q9UGQ2 172 aa15.08■□□□□ 0
SS18-218ENST00000581021 IAPPP10997 89 aa15.07■□□□□ 0
SS18-218ENST00000581021 RND2P52198 227 aa15.07■□□□□ 0
SS18-218ENST00000581021 TIGITQ495A1 244 aa15.07■□□□□ 0
SS18-218ENST00000581021 C4orf46Q504U0 113 aa15.07■□□□□ 0
SS18-218ENST00000581021 S100ZQ8WXG8 99 aa15.07■□□□□ 0
SS18-218ENST00000581021 MAGT1Q9H0U3 335 aa15.07■□□□□ 0
SS18-218ENST00000581021 SMPXQ9UHP9 88 aa15.07■□□□□ 0
SS18-218ENST00000581021 PUS1Q9Y606 427 aaKnown RBP eCLIP15.07■□□□□ 0
SS18-218ENST00000581021 IGHV3OR16-13A0A075B7E8 117 aa15.06■□□□□ 0
SS18-218ENST00000581021 IGHV3-74A0A0B4J1X5 117 aa15.06■□□□□ 0
SS18-218ENST00000581021 PIGBOS1A0A0B4J2F0 54 aa15.06■□□□□ 0
SS18-218ENST00000581021 IGHV7-4-1A0A0J9YVY3 117 aa15.06■□□□□ 0
SS18-218ENST00000581021 IFNA10P01566 189 aa15.06■□□□□ 0
SS18-218ENST00000581021 APOHP02749 345 aaPredicted RBP15.06■□□□□ 0
SS18-218ENST00000581021 TCRBP04435 133 aa15.06■□□□□ 0
SS18-218ENST00000581021 IGLC1P0CG04 106 aa15.06■□□□□ 0
SS18-218ENST00000581021 IFITM3Q01628 133 aa15.06■□□□□ 0
SS18-218ENST00000581021 ZNF600Q6ZNG1 722 aa15.06■□□□□ 0
SS18-218ENST00000581021 DEFB125Q8N687 156 aa15.06■□□□□ 0
SS18-218ENST00000581021 U3KQ87 197 aa15.06■□□□□ 0
SS18-218ENST00000581021 TRAV6A0A075B6T7 132 aa15.05■□□□□ -0
SS18-218ENST00000581021 RPS10-NUDT3A0A1W2PQS6 291 aa15.05■□□□□ -0
SS18-218ENST00000581021 FAM90A26D6RGX4 464 aa15.05■□□□□ -0
SS18-218ENST00000581021 CHEK1O14757 476 aa15.05■□□□□ -0
SS18-218ENST00000581021 NHLRC4P0CG21 123 aaPredicted RBP15.05■□□□□ -0
SS18-218ENST00000581021 SLC16A13Q7RTY0 426 aa15.05■□□□□ -0
SS18-218ENST00000581021 TMEM116Q8NCL8 245 aa15.05■□□□□ -0
SS18-218ENST00000581021 RNF2Q99496 336 aa15.05■□□□□ -0
SS18-218ENST00000581021 RHPN1-AS1Q9BWJ2 59 aa15.05■□□□□ -0
SS18-218ENST00000581021 NUDT15Q9NV35 164 aa15.05■□□□□ -0
SS18-218ENST00000581021 TRAV25A0A0B4J276 109 aa15.04■□□□□ -0
SS18-218ENST00000581021 LILRB2Q8N423 598 aa15.04■□□□□ -0
SS18-218ENST00000581021 COQ8AQ8NI60 647 aa15.04■□□□□ -0
SS18-218ENST00000581021 MITD1Q8WV92 249 aa15.04■□□□□ -0
SS18-218ENST00000581021 TSPAN4O14817 238 aa15.03■□□□□ -0
SS18-218ENST00000581021 SLC25A4P12235 298 aa15.03■□□□□ -0
SS18-218ENST00000581021 ASAH1Q13510 395 aa15.03■□□□□ -0
SS18-218ENST00000581021 LINC00322Q6ZN03 302 aaPredicted RBP15.03■□□□□ -0
SS18-218ENST00000581021 RBPMS2Q6ZRY4 209 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms