RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 CLEC2LP0C7M8 214 aa13.6□□□□□ -0.23
NDEL1-209ENST00000580738 CBX5P45973 191 aa13.6□□□□□ -0.23
NDEL1-209ENST00000580738 HSPE1P61604 102 aaKnown RBP13.6□□□□□ -0.23
NDEL1-209ENST00000580738 ERHP84090 104 aaKnown RBP13.6□□□□□ -0.23
NDEL1-209ENST00000580738 Q8N1X5 172 aa13.6□□□□□ -0.23
NDEL1-209ENST00000580738 FAM210BQ96KR6 192 aa13.6□□□□□ -0.23
NDEL1-209ENST00000580738 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
NDEL1-209ENST00000580738 FXYD6Q9H0Q3 95 aa13.6□□□□□ -0.23
NDEL1-209ENST00000580738 APOBP04114 4563 aaKnown RBP13.6□□□□□ -0.23
NDEL1-209ENST00000580738 HELTA6NFD8 242 aa13.59□□□□□ -0.23
NDEL1-209ENST00000580738 GPR31O00270 319 aa13.59□□□□□ -0.23
NDEL1-209ENST00000580738 PMP2P02689 132 aa13.59□□□□□ -0.23
NDEL1-209ENST00000580738 NUTF2P61970 127 aaKnown RBP13.59□□□□□ -0.23
NDEL1-209ENST00000580738 PHLDA2Q53GA4 152 aa13.59□□□□□ -0.23
NDEL1-209ENST00000580738 H2BFWTQ7Z2G1 175 aa13.59□□□□□ -0.23
NDEL1-209ENST00000580738 NRG4Q8WWG1 115 aa13.59□□□□□ -0.23
NDEL1-209ENST00000580738 HTN3P15516 51 aa13.58□□□□□ -0.24
NDEL1-209ENST00000580738 SDC2P34741 201 aa13.58□□□□□ -0.24
NDEL1-209ENST00000580738 MXD1Q05195 221 aa13.58□□□□□ -0.24
NDEL1-209ENST00000580738 MLANAQ16655 118 aa13.58□□□□□ -0.24
NDEL1-209ENST00000580738 IZUMO4Q1ZYL8 232 aa13.58□□□□□ -0.24
NDEL1-209ENST00000580738 ZNF705AQ6ZN79 300 aaPredicted RBP13.58□□□□□ -0.24
NDEL1-209ENST00000580738 IFT46Q9NQC8 304 aa13.58□□□□□ -0.24
NDEL1-209ENST00000580738 NACAE9PAV3 2078 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 A0A0A6YYH2 397 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 A6NJ64 397 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 ZNF705FA8MVS1 300 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-209ENST00000580738 H3BMM0 161 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 ZNF705DP0CH99 300 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-209ENST00000580738 ZNF705BP0CI00 300 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-209ENST00000580738 SNCAP37840 140 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 IDNKQ5T6J7 187 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 TMEM230Q96A57 120 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 MRGPRFQ96AM1 343 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 NEU1Q99519 415 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 FNDC4Q9H6D8 234 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-209ENST00000580738 DIABLOQ9NR28 239 aa13.57□□□□□ -0.24
NDEL1-209ENST00000580738 CLN5O75503 358 aa13.56□□□□□ -0.24
NDEL1-209ENST00000580738 SCAND1P57086 179 aa13.56□□□□□ -0.24
NDEL1-209ENST00000580738 FAM222AQ5U5X8 452 aa13.56□□□□□ -0.24
NDEL1-209ENST00000580738 TBC1D26Q86UD7 250 aa13.56□□□□□ -0.24
NDEL1-209ENST00000580738 NARS2Q96I59 477 aaKnown RBP13.56□□□□□ -0.24
NDEL1-209ENST00000580738 SCRT2Q9NQ03 307 aa13.56□□□□□ -0.24
NDEL1-209ENST00000580738 DKK2Q9UBU2 259 aa13.56□□□□□ -0.24
NDEL1-209ENST00000580738 U3KQE9 123 aa13.56□□□□□ -0.24
NDEL1-209ENST00000580738 IGHV3OR16-12A0A075B7B8 117 aa13.55□□□□□ -0.24
NDEL1-209ENST00000580738 TMEM189A5PLL7 270 aa13.55□□□□□ -0.24
NDEL1-209ENST00000580738 IGKV1-17P01599 117 aa13.55□□□□□ -0.24
NDEL1-209ENST00000580738 TIGITQ495A1 244 aa13.55□□□□□ -0.24
NDEL1-209ENST00000580738 KCTD21Q4G0X4 260 aa13.55□□□□□ -0.24
NDEL1-209ENST00000580738 GLMPQ8WWB7 406 aa13.55□□□□□ -0.24
NDEL1-209ENST00000580738 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
NDEL1-209ENST00000580738 RNF167Q9H6Y7 350 aa13.55□□□□□ -0.24
NDEL1-209ENST00000580738 FAM212BQ9NTI7 297 aaPredicted RBP13.55□□□□□ -0.24
NDEL1-209ENST00000580738 FAM90A26D6RGX4 464 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 RNASE2P10153 161 aaKnown RBP13.54□□□□□ -0.24
NDEL1-209ENST00000580738 EIF2B2P49770 351 aaKnown RBP13.54□□□□□ -0.24
NDEL1-209ENST00000580738 FXYD7P58549 80 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 C16orf54Q6UWD8 224 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 OR5H2Q8NGV7 314 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 OR6F1Q8NGZ6 308 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 OR4X1Q8NH49 305 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 ANAPC10Q9UM13 185 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 SSR3Q9UNL2 185 aa13.54□□□□□ -0.24
NDEL1-209ENST00000580738 SMIM9A6NGZ8 99 aa13.53□□□□□ -0.24
NDEL1-209ENST00000580738 PSMB9P28065 219 aa13.53□□□□□ -0.24
NDEL1-209ENST00000580738 SNRPD3P62318 126 aaKnown RBP13.53□□□□□ -0.24
NDEL1-209ENST00000580738 RFNGQ9Y644 331 aa13.53□□□□□ -0.24
NDEL1-209ENST00000580738 DNAH5Q8TE73 4624 aa13.53□□□□□ -0.24
NDEL1-209ENST00000580738 A0A0B4J293 547 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 IGKV3-20P01619 116 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 HLA-DRB4P13762 266 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 OPRK1P41145 380 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 AP2S1P53680 142 aaPredicted RBP13.52□□□□□ -0.25
NDEL1-209ENST00000580738 TAS2R46P59540 309 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 DEFB1P60022 68 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 GDF5OSQ5U4N7 250 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 LYSMD2Q8IV50 215 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 SLC35G3Q8N808 338 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 CNBD2Q96M20 576 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.25
NDEL1-209ENST00000580738 BLOC1S6Q9UL45 172 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 HLA-DRB4X5D2U9 266 aa13.52□□□□□ -0.25
NDEL1-209ENST00000580738 INS-IGF2F8WCM5 200 aa13.51□□□□□ -0.25
NDEL1-209ENST00000580738 CORTO00230 105 aa13.51□□□□□ -0.25
NDEL1-209ENST00000580738 NAT1P18440 290 aa13.51□□□□□ -0.25
NDEL1-209ENST00000580738 HRH1P35367 487 aa13.51□□□□□ -0.25
NDEL1-209ENST00000580738 ETV6P41212 452 aa13.51□□□□□ -0.25
NDEL1-209ENST00000580738 TMED3Q9Y3Q3 217 aa13.51□□□□□ -0.25
NDEL1-209ENST00000580738 TEX48A0A1B0GUV7 120 aa13.5□□□□□ -0.25
NDEL1-209ENST00000580738 IGKV1-5P01602 117 aa13.5□□□□□ -0.25
NDEL1-209ENST00000580738 HNRNPCP07910 306 aaKnown RBP eCLIP13.5□□□□□ -0.259e-7■□□□□ 8.9
NDEL1-209ENST00000580738 HLA-DMAP28067 261 aa13.5□□□□□ -0.25
NDEL1-209ENST00000580738 S100GP29377 79 aa13.5□□□□□ -0.25
NDEL1-209ENST00000580738 SUB1P53999 127 aaKnown RBP eCLIP13.5□□□□□ -0.25
NDEL1-209ENST00000580738 OXA1LQ15070 435 aa13.5□□□□□ -0.25
NDEL1-209ENST00000580738 C6orf223Q8N319 242 aa13.5□□□□□ -0.25
NDEL1-209ENST00000580738 NRN1Q9NPD7 142 aa13.5□□□□□ -0.25
NDEL1-209ENST00000580738 NBDYA0A0U1RRE5 68 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms