RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 HSD17B10Q99714 261 aaKnown RBP5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 URM1Q9BTM9 101 aaKnown RBP5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 COMMD5Q9GZQ3 224 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 VCX3BQ9H321 246 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 SCPEP1Q9HB40 452 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 ZNF586Q9NXT0 402 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 SPATA2Q9UM82 520 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 PUS1Q9Y606 427 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 PKHD1L1Q86WI1 4243 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 A0A1B0GU03 582 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 LOC102723971A0A1B0GUV8 181 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 A0A1W2PPQ1 181 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 GYG2O15488 501 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 CYB5BO43169 146 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 WBP4O75554 376 aaKnown RBP5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 DNAH10OSP0CZ25 163 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 TRAPPC2P0DI81 140 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 TRAPPC2BP0DI82 140 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 GNB3P16520 340 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 CD36P16671 472 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 NFYAP23511 347 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 ID3Q02535 119 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 SSX1Q16384 188 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 POU2AF1Q16633 256 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 PSMG4Q5JS54 123 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 SLC25A46Q96AG3 418 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 Q96MT0 163 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 GINS3Q9BRX5 216 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 NDUFA4L2Q9NRX3 87 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 TAS2R8Q9NYW2 309 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 OR2W1Q9Y3N9 320 aa5.28□□□□□ -1.56
SMARCE1-217ENST00000580654 EI24O14681 340 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 IFNA5P01569 189 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 GNRHRP30968 328 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 P2RY1P47900 373 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 ALDH3B2P48448 385 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 MFAP4P55083 255 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 DEFB1P60022 68 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 NUTF2P61970 127 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 RCN1Q15293 331 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 RBM48Q5RL73 367 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 TMEM69Q5SWH9 247 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 GDF5OSQ5U4N7 250 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 DGAT2L7PQ6IED9 249 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 Q6ZS49 121 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 HSD17B13Q7Z5P4 300 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 C1orf158Q8N1D5 194 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 ZNF709Q8N972 641 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 CCDC197Q8NCU1 140 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 DEFB104AQ8WTQ1 72 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 CENPNQ96H22 339 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 UHRF2Q96PU4 802 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 UPK3BQ9BT76 320 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 TPPP3Q9BW30 176 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 DCSTAMPQ9H295 470 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 TMEM140Q9NV12 185 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 DIMT1Q9UNQ2 313 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 AP4S1Q9Y587 144 aa5.27□□□□□ -1.57
SMARCE1-217ENST00000580654 HELTA6NFD8 242 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 HSBP1L1C9JCN9 74 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 F5H768 121 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 MFNGO00587 321 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 TNFSF12O43508 249 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 PRM2P04554 102 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 CD1AP06126 327 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 FGF2P09038 288 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 HLA-DRB4P13762 266 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 GCSHP23434 173 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 NUP62P37198 522 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 TAS2R31P59538 309 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 DNAL1Q4LDG9 190 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 OGFRL1Q5TC84 451 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 THOC7Q6I9Y2 204 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 SPAG16Q8N0X2 631 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 OR56B1Q8NGI3 324 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 PHYHIPQ92561 330 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 LSM10Q969L4 123 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 C1orf43Q9BWL3 253 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 ELF5Q9UKW6 265 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 TNFRSF18Q9Y5U5 241 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 HLA-DRB4X5D2U9 266 aa5.26□□□□□ -1.57
SMARCE1-217ENST00000580654 A0A087WTM6 91 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 SLC17A2O00624 439 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 RBFOX2O43251 390 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 GNG7O60262 68 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 CIB2O75838 187 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 SLC22A5O76082 557 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 MT-CO2P00403 227 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 OXTP01178 125 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 IGKV3-20P01619 116 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 NQO2P16083 231 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 NPPCP23582 126 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 CRYBB3P26998 211 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 TAGLN2P37802 199 aaKnown RBP5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 ATP5IP56385 69 aaPredicted RBP5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 CLDN12P56749 244 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 ERVFC1-1P60608 527 aa5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 MRPS15P82914 257 aaKnown RBP5.25□□□□□ -1.57
SMARCE1-217ENST00000580654 DHRS2Q13268 280 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms