RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ZNF616Q08AN1 781 aa14.6□□□□□ -0.07
PRKCA-203ENST00000578063 ACSM6Q6P461 480 aa14.6□□□□□ -0.07
PRKCA-203ENST00000578063 SLC35E3Q7Z769 313 aa14.6□□□□□ -0.07
PRKCA-203ENST00000578063 THAP8Q8NA92 274 aa14.6□□□□□ -0.07
PRKCA-203ENST00000578063 TMEM116Q8NCL8 245 aa14.6□□□□□ -0.07
PRKCA-203ENST00000578063 PXMP4Q9Y6I8 212 aa14.6□□□□□ -0.07
PRKCA-203ENST00000578063 IGKV1OR2-108A0A075B7D4 117 aa14.59□□□□□ -0.07
PRKCA-203ENST00000578063 TSPAN15O95858 294 aa14.59□□□□□ -0.07
PRKCA-203ENST00000578063 IGF1P05019 195 aa14.59□□□□□ -0.07
PRKCA-203ENST00000578063 RPL29P47914 159 aaKnown RBP14.59□□□□□ -0.07
PRKCA-203ENST00000578063 COMMD7Q86VX2 200 aa14.59□□□□□ -0.07
PRKCA-203ENST00000578063 OR5T1Q8NG75 326 aa14.59□□□□□ -0.07
PRKCA-203ENST00000578063 NPIPB3Q92617 1050 aa14.59□□□□□ -0.07
PRKCA-203ENST00000578063 FANCD2OSQ96PS1 177 aa14.59□□□□□ -0.07
PRKCA-203ENST00000578063 RPRMQ9NS64 109 aa14.59□□□□□ -0.07
PRKCA-203ENST00000578063 TRAV41A0A0B4J266 112 aa14.58□□□□□ -0.07
PRKCA-203ENST00000578063 LINC01548A6NM66 108 aa14.58□□□□□ -0.07
PRKCA-203ENST00000578063 K7EIM0 57 aa14.58□□□□□ -0.07
PRKCA-203ENST00000578063 HOXA3O43365 443 aaPredicted RBP14.58□□□□□ -0.07
PRKCA-203ENST00000578063 SCGB2A2Q13296 93 aa14.58□□□□□ -0.07
PRKCA-203ENST00000578063 KLK9Q2XQG4 91 aa14.58□□□□□ -0.07
PRKCA-203ENST00000578063 ACOT6Q3I5F7 207 aaPredicted RBP14.58□□□□□ -0.07
PRKCA-203ENST00000578063 KLK9Q9UKQ9 250 aa14.58□□□□□ -0.07
PRKCA-203ENST00000578063 ATP6V1G1O75348 118 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 IGHV3-48P01763 117 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 OR10J1P30954 320 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 B2MP61769 119 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 BLCAPP62952 87 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 MIC13Q5XKP0 118 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 TMEM86BQ8N661 226 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 STPG3Q8N7X2 389 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 SIGLECL1Q8N7X8 197 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 LYPD6BQ8NI32 183 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 VSIRQ9H7M9 311 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 MRPL36Q9P0J6 103 aaKnown RBP14.58□□□□□ -0.08
PRKCA-203ENST00000578063 ZNF580Q9UK33 172 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 SLC45A2Q9UMX9 530 aa14.58□□□□□ -0.08
PRKCA-203ENST00000578063 OTOGQ6ZRI0 2925 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 NUDT19A8MXV4 375 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 M6PRP20645 277 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 RAB2AP61019 212 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 PRR20EP86478 221 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 PRR20CP86479 221 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 PRR20DP86480 221 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 PRR20BP86481 221 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 PRR20AP86496 221 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 C19orf54Q5BKX5 351 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 OR4X1Q8NH49 305 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 HRH4Q9H3N8 390 aa14.57□□□□□ -0.08
PRKCA-203ENST00000578063 FLNBO75369 2602 aaKnown RBP14.56□□□□□ -0.08
PRKCA-203ENST00000578063 IGHV3-21A0A0B4J1V1 117 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 TCRBV4S1A1TA0A5B7 111 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 ZFP92A6NM28 416 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 G3V318 75 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 AP4M1O00189 453 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 H2AFB1P0C5Y9 115 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 RBMS3Q6XE24 437 aaKnown RBP14.56□□□□□ -0.08
PRKCA-203ENST00000578063 CYP2G1PQ6ZSU1 146 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 OR10G4Q8NGN3 311 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 OR10G9Q8NGN4 311 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 OR10G7Q8NGN6 311 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 TNFRSF19Q9NS68 423 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 SLC39A9Q9NUM3 307 aa14.56□□□□□ -0.08
PRKCA-203ENST00000578063 SELENOTP62341 195 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 IL34Q6ZMJ4 242 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 RCC1LQ96I51 464 aaKnown RBP14.55□□□□□ -0.08
PRKCA-203ENST00000578063 TRGV9Q99603 122 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 TLN2Q9Y4G6 2542 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 IGKV1D-37A0A075B6S9 117 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 TEX46H3BTG2 121 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 YIF1AO95070 293 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 RPP25LQ8N5L8 163 aaKnown RBP14.55□□□□□ -0.08
PRKCA-203ENST00000578063 BPIFCQ8NFQ6 507 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 NPFFR1Q9GZQ6 430 aa14.55□□□□□ -0.08
PRKCA-203ENST00000578063 TRBV9A0A0B4J1U6 114 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 CLN5O75503 358 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 OR2J3O76001 311 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 HBE1P02100 147 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 COMMD1Q8N668 190 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 MARC2Q969Z3 335 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 SMR3AQ99954 134 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 ACTR3CQ9C0K3 210 aaPredicted RBP14.54□□□□□ -0.08
PRKCA-203ENST00000578063 ZNF355PQ9NSJ1 428 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 FBXL7Q9UJT9 491 aa14.54□□□□□ -0.08
PRKCA-203ENST00000578063 TRAV1-1A0A0B4J248 108 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 CTXND1A0A1B0GTU2 59 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 MFSD2BA6NFX1 497 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 LINC00869P0C866 280 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 NPBWR1P48145 328 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 MFAP4P55083 255 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 VN1R17PQ8TDU5 208 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 SFT2D1Q8WV19 159 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 MBD3L1Q8WWY6 194 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 ACANP16112 2415 aa14.53□□□□□ -0.08
PRKCA-203ENST00000578063 RAB19A4D1S5 217 aa14.52□□□□□ -0.08
PRKCA-203ENST00000578063 SEC14L6B5MCN3 397 aa14.52□□□□□ -0.08
PRKCA-203ENST00000578063 H3BUA1 57 aa14.52□□□□□ -0.08
PRKCA-203ENST00000578063 NDUFB8O95169 186 aa14.52□□□□□ -0.08
PRKCA-203ENST00000578063 BRI3O95415 125 aa14.52□□□□□ -0.08
PRKCA-203ENST00000578063 LY6G6DO95868 133 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms