RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 MIR17HGQ75NE6 70 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 DEFB119Q8N690 84 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 OR5A1Q8NGJ0 315 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 STAG3L4Q8TBR4 150 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 OR52E6Q96RD3 313 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 NAA38Q9BRA0 125 aaKnown RBP0.46□□□□□ -2.34
TOP2A-202ENST00000577541 SLC50A1Q9BRV3 221 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 GLTPQ9NZD2 209 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 ERGIC3Q9Y282 383 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 MYOFQ9NZM1 2061 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 TRAV9-1A0A075B6T8 112 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 C1orf196B1AJZ1 125 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 E2F6O75461 281 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 IFNA6P05013 189 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 HOXA6P31267 233 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 CAPZBP47756 277 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 OMPP47874 163 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 FXYD2P54710 66 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 AP3S2P59780 193 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 STX5Q13190 355 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 ELOBQ15370 118 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 RGS21Q2M5E4 152 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 IAH1Q2TAA2 248 aaPredicted RBP0.45□□□□□ -2.34
TOP2A-202ENST00000577541 SPANXN3Q5MJ09 141 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 UNQ6190/PRO20217Q6UXQ8 127 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 Q8IYB0 196 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 C3orf56Q8N813 242 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 MNS1Q8NEH6 495 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 OR51A2Q8NGJ7 313 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 SLC25A40Q8TBP6 338 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 C10orf105Q8TEF2 133 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 C11orf40Q8WZ69 217 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 TMEM106AQ96A25 262 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 DCUN1D1Q96GG9 259 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 SCGB3A1Q96QR1 104 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 ULBP3Q9BZM4 244 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 SLC22A13Q9Y226 551 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 C22orf24Q9Y442 160 aa0.45□□□□□ -2.34
TOP2A-202ENST00000577541 PLXND1Q9Y4D7 1925 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 DIDO1Q9BTC0 2240 aaKnown RBP0.44□□□□□ -2.34
TOP2A-202ENST00000577541 hCG_1818297A0A087WSY0 165 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 A0A1B0GV50 99 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 IGKV2-29A2NJV5 120 aaPredicted RBP0.44□□□□□ -2.34
TOP2A-202ENST00000577541 A8MT66 165 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 SDCBPO00560 298 aaPredicted RBP0.44□□□□□ -2.34
TOP2A-202ENST00000577541 PIRO00625 290 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 MRPS14O60783 128 aaKnown RBP0.44□□□□□ -2.34
TOP2A-202ENST00000577541 LYZL6O75951 148 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 S100A6P06703 90 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 HTR1AP08908 422 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 HSD11B1P28845 292 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 FADDQ13158 208 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 EDDM3AQ14507 147 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 TAF1AQ15573 450 aaPredicted RBP0.44□□□□□ -2.34
TOP2A-202ENST00000577541 KHDC3LQ587J8 217 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 TMEM97Q5BJF2 176 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.44□□□□□ -2.34
TOP2A-202ENST00000577541 LCA10Q71F78 164 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 HIST3H2BBQ8N257 126 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 EXOC3-AS1Q8N2X6 119 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 GDPD1Q8N9F7 314 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 WFDC11Q8NEX6 87 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 OR10X1Q8NGY0 326 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 OBSCN-AS1Q96MR7 158 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 SIGMAR1Q99720 223 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 YIPF3Q9GZM5 350 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 TMEM133Q9H2Q1 129 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 RP1P56715 2156 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 CAMSAP1Q5T5Y3 1602 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 SCN10AQ9Y5Y9 1956 aa0.44□□□□□ -2.34
TOP2A-202ENST00000577541 MED1Q15648 1581 aaPredicted RBP0.44□□□□□ -2.34
TOP2A-202ENST00000577541 TECTAO75443 2155 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 ECM29Q5VYK3 1845 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 RIMBP3CA6NJZ7 1639 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 RIMBP3BA6NNM3 1639 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 RIMBP3Q9UFD9 1639 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 TRAV4A0A0B4J268 109 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 PDE6DO43924 150 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 CST2P09228 141 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 MGST1P10620 155 aaKnown RBP0.43□□□□□ -2.34
TOP2A-202ENST00000577541 ATP5G3P48201 142 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 CEBPGP53567 150 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 RAB4BP61018 213 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 CNBPP62633 177 aaKnown RBP0.43□□□□□ -2.34
TOP2A-202ENST00000577541 PRB3Q04118 309 aaPredicted RBP0.43□□□□□ -2.34
TOP2A-202ENST00000577541 RHEBQ15382 184 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 SPRNQ5BIV9 151 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 SOSTDC1Q6X4U4 206 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 AAED1Q7RTV5 226 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 LINC00311Q8N616 119 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 OR8D4Q8NGM9 314 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 OR13D1Q8NGV5 346 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 CT55Q8WUE5 264 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 ZC2HC1AQ96GY0 325 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 GINS4Q9BRT9 223 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 C20orf27Q9GZN8 174 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 COMMD5Q9GZQ3 224 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 OSTCQ9NRP0 149 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 SLC39A9Q9NUM3 307 aa0.43□□□□□ -2.34
TOP2A-202ENST00000577541 MED29Q9NX70 200 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms