RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 LPCAT3Q6P1A2 487 aa9.58□□□□□ -0.88
COPS3-214ENST00000577246 DCANP1Q8TF63 244 aa9.58□□□□□ -0.88
COPS3-214ENST00000577246 SSR3Q9UNL2 185 aa9.58□□□□□ -0.88
COPS3-214ENST00000577246 A0A1B0GU03 582 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 C16orf90A8MZG2 172 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 TMEM50AO95807 157 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 DHRS2Q13268 280 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 PSMG4Q5JS54 123 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 OR5H2Q8NGV7 314 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 OR6F1Q8NGZ6 308 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 TMEM230Q96A57 120 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 SLC25A38Q96DW6 304 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 RAB40CQ96S21 281 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 NEU1Q99519 415 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 RNF167Q9H6Y7 350 aa9.57□□□□□ -0.88
COPS3-214ENST00000577246 DYNC1H1Q14204 4646 aaKnown RBP9.57□□□□□ -0.88
COPS3-214ENST00000577246 DNAH17Q9UFH2 4485 aa9.56□□□□□ -0.88
COPS3-214ENST00000577246 SMIM9A6NGZ8 99 aa9.56□□□□□ -0.88
COPS3-214ENST00000577246 RFX2P48378 723 aa9.56□□□□□ -0.88
COPS3-214ENST00000577246 FAM3BP58499 235 aaPredicted RBP9.56□□□□□ -0.88
COPS3-214ENST00000577246 SLC35G3Q8N808 338 aa9.56□□□□□ -0.88
COPS3-214ENST00000577246 SEC22AQ96IW7 307 aa9.56□□□□□ -0.88
COPS3-214ENST00000577246 SEPSECSQ9HD40 501 aaKnown RBP9.56□□□□□ -0.88
COPS3-214ENST00000577246 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
COPS3-214ENST00000577246 PKD1P98161 4303 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 MEIS3P1A6NDR6 274 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 INS-IGF2F8WCM5 200 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 TMEM127O75204 238 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 CLN5O75503 358 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 PSMB9P28065 219 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 SDC2P34741 201 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 PHLDA2Q53GA4 152 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 IDNKQ5T6J7 187 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 OR5H6Q8NGV6 325 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 FCGR1BQ92637 280 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 PDCD10Q9BUL8 212 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 SCRT1Q9BWW7 348 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 FXYD6Q9H0Q3 95 aa9.55□□□□□ -0.88
COPS3-214ENST00000577246 TRAV30A0A087WSZ9 112 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 PMP2P02689 132 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 OPRK1P41145 380 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 HSPA13P48723 471 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 HOXA1P49639 335 aaPredicted RBP9.54□□□□□ -0.88
COPS3-214ENST00000577246 EMP1P54849 157 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 MXD1Q05195 221 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 ZNF705AQ6ZN79 300 aaPredicted RBP9.54□□□□□ -0.88
COPS3-214ENST00000577246 OR4X1Q8NH49 305 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 MRGPRFQ96AM1 343 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 VCX3BQ9H321 246 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 TMED3Q9Y3Q3 217 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 RFNGQ9Y644 331 aa9.54□□□□□ -0.88
COPS3-214ENST00000577246 H3BMM0 161 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 ATG12O94817 140 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 PPP5CP53041 499 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 GABARAPL2P60520 117 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 TBC1D26Q86UD7 250 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 S100A16Q96FQ6 103 aaKnown RBP9.53□□□□□ -0.88
COPS3-214ENST00000577246 CNBD2Q96M20 576 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 NIPSNAP3BQ9BS92 247 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 ENY2Q9NPA8 101 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 ANAPC10Q9UM13 185 aa9.53□□□□□ -0.88
COPS3-214ENST00000577246 RPS10-NUDT3A0A1W2PQS6 291 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 ZNF705FA8MVS1 300 aaPredicted RBP9.52□□□□□ -0.89
COPS3-214ENST00000577246 HNRNPCP07910 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
COPS3-214ENST00000577246 ZNF705DP0CH99 300 aaPredicted RBP9.52□□□□□ -0.89
COPS3-214ENST00000577246 ZNF705BP0CI00 300 aaPredicted RBP9.52□□□□□ -0.89
COPS3-214ENST00000577246 HLA-DRB4P13762 266 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 RPL5P46777 297 aaKnown RBP9.52□□□□□ -0.89
COPS3-214ENST00000577246 TSPAN5P62079 268 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 OXA1LQ15070 435 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 SPINK9Q5DT21 86 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 Q8WTZ3 238 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 NRN1Q9NPD7 142 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 DKK2Q9UBU2 259 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 HLA-DRB4X5D2U9 266 aa9.52□□□□□ -0.89
COPS3-214ENST00000577246 FAM90A26D6RGX4 464 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 GSTZ1O43708 216 aaPredicted RBP9.51□□□□□ -0.89
COPS3-214ENST00000577246 IGKV1-39P01597 117 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 IGKV1D-39P04432 117 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 NAT1P18440 290 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 HRH1P35367 487 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 TMEM69Q5SWH9 247 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 C16orf54Q6UWD8 224 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 Q8N1X5 172 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 C15orf53Q8NAA6 179 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 GLMPQ8WWB7 406 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 ATG101Q9BSB4 218 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 U3KQE9 123 aa9.51□□□□□ -0.89
COPS3-214ENST00000577246 IGHV3OR16-12A0A075B7B8 117 aa9.5□□□□□ -0.89
COPS3-214ENST00000577246 IGKV1-17P01599 117 aa9.5□□□□□ -0.89
COPS3-214ENST00000577246 CLEC2LP0C7M8 214 aa9.5□□□□□ -0.89
COPS3-214ENST00000577246 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
COPS3-214ENST00000577246 HTN3P15516 51 aa9.5□□□□□ -0.89
COPS3-214ENST00000577246 NKX2-1P43699 371 aaPredicted RBP9.5□□□□□ -0.89
COPS3-214ENST00000577246 AKR1C2P52895 323 aa9.5□□□□□ -0.89
COPS3-214ENST00000577246 UCP3P55916 312 aa9.5□□□□□ -0.89
COPS3-214ENST00000577246 TAS2R20P59543 309 aa9.5□□□□□ -0.89
COPS3-214ENST00000577246 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
COPS3-214ENST00000577246 CROCCP3Q8IVE0 287 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms