RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 CXorf58Q96LI9 332 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 BOLA1Q9Y3E2 137 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 PRSS46E5RG02 174 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 FNDC10F2Z333 226 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 I3L2K1 104 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 K7EIM0 57 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 JTBO76095 146 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 IGLV1-40P01703 118 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 ELANEP08246 267 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 FGF7P21781 194 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 NPBWR1P48145 328 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 RND2P52198 227 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 MFAP4P55083 255 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 RAB31Q13636 194 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 ZNF709Q8N972 641 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 LINC01006Q8NI28 216 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 VN1R17PQ8TDU5 208 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 USMG5Q96IX5 58 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
ERCC4-208ENST00000576348 WFDC1Q9HC57 220 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 C21orf62Q9NYP8 219 aa12.88□□□□□ -0.35
ERCC4-208ENST00000576348 TRBV9A0A0B4J1U6 114 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 CLPSL1A2RUU4 121 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 HAX1O00165 279 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 BRI3O95415 125 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 RAB9AP51151 201 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 GAMTQ14353 236 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 MLANAQ16655 118 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 RPL7L1Q6DKI1 246 aaKnown RBP12.87□□□□□ -0.35
ERCC4-208ENST00000576348 SLC51BQ86UW2 128 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 OR5AU1Q8NGC0 362 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 SCARB1Q8WTV0 552 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 NPIPB3Q92617 1050 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 NPVFQ9HCQ7 196 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 RNF114Q9Y508 228 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 S4R3C0 116 aa12.87□□□□□ -0.35
ERCC4-208ENST00000576348 PLXNB1O43157 2135 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 TET2Q6N021 2002 aaPredicted RBP12.86□□□□□ -0.35
ERCC4-208ENST00000576348 MFSD2BA6NFX1 497 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 ZFP92A6NM28 416 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 GNG7O60262 68 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 IGHV3-23P01764 117 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 TPT1P13693 172 aaKnown RBP12.86□□□□□ -0.35
ERCC4-208ENST00000576348 VWC2Q2TAL6 325 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 KHDC1LQ5JSQ8 128 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 BTNL8Q6UX41 500 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 HSD17B11Q8NBQ5 300 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 KLK15Q9H2R5 256 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 GAR1Q9NY12 217 aaKnown RBP12.86□□□□□ -0.35
ERCC4-208ENST00000576348 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
ERCC4-208ENST00000576348 TRBV7-1A0A0A6YYK4 115 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 FABP1P07148 127 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 PSMB8P28062 276 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 TEPPQ6URK8 271 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 LCNL1Q6ZST4 164 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 TMEM144Q7Z5S9 345 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 OR4X1Q8NH49 305 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 TXN2Q99757 166 aa12.85□□□□□ -0.35
ERCC4-208ENST00000576348 ANK3Q12955 4377 aaKnown RBP12.85□□□□□ -0.35
ERCC4-208ENST00000576348 C17orf112F2Z3M2 114 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 MPDU1O75352 247 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 MDKP21741 143 aaPredicted RBP12.84□□□□□ -0.35
ERCC4-208ENST00000576348 OR10J1P30954 320 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 TREML4Q6UXN2 200 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.84□□□□□ -0.35
ERCC4-208ENST00000576348 TMEM116Q8NCL8 245 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 WDR61Q9GZS3 305 aaKnown RBP12.84□□□□□ -0.35
ERCC4-208ENST00000576348 CYTL1Q9NRR1 136 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 WDR83OSQ9Y284 106 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 SVEP1Q4LDE5 3571 aa12.84□□□□□ -0.35
ERCC4-208ENST00000576348 TRAV30A0A087WSZ9 112 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 CLN5O75503 358 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 IGHV3-11P01762 117 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 RPLP1P05386 114 aaKnown RBP12.83□□□□□ -0.36
ERCC4-208ENST00000576348 CAMLGP49069 296 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 FOXL1Q12952 345 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 FAM209BQ5JX69 171 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.36
ERCC4-208ENST00000576348 CLEC19AQ6UXS0 136 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 ZNF502Q8TBZ5 544 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 GNPNAT1Q96EK6 184 aaPredicted RBP12.83□□□□□ -0.36
ERCC4-208ENST00000576348 PARD6GQ9BYG4 376 aaPredicted RBP12.83□□□□□ -0.36
ERCC4-208ENST00000576348 GNB4Q9HAV0 340 aa12.83□□□□□ -0.36
ERCC4-208ENST00000576348 TCRBV4S1A1TA0A5B7 111 aa12.82□□□□□ -0.36
ERCC4-208ENST00000576348 OR2T8A6NH00 312 aa12.82□□□□□ -0.36
ERCC4-208ENST00000576348 NUPL2O15504 423 aaKnown RBP12.82□□□□□ -0.36
ERCC4-208ENST00000576348 GPR183P32249 361 aa12.82□□□□□ -0.36
ERCC4-208ENST00000576348 BAP18Q8IXM2 172 aa12.82□□□□□ -0.36
ERCC4-208ENST00000576348 STOML3Q8TAV4 291 aa12.82□□□□□ -0.36
ERCC4-208ENST00000576348 ST8SIA2Q92186 375 aa12.82□□□□□ -0.36
ERCC4-208ENST00000576348 OR5B12Q96R08 314 aa12.82□□□□□ -0.36
ERCC4-208ENST00000576348 MRPL36Q9P0J6 103 aaKnown RBP12.82□□□□□ -0.36
ERCC4-208ENST00000576348 TEP1Q99973 2627 aaKnown RBP12.82□□□□□ -0.36
ERCC4-208ENST00000576348 NUDT19A8MXV4 375 aa12.81□□□□□ -0.36
ERCC4-208ENST00000576348 CLEC3BP05452 202 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms