RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 GSG1LQ6UXU4 331 aa11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 ZNF114Q8NC26 417 aa11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 TMEM230Q96A57 120 aa11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 TSC22D3Q99576 134 aa11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 MGLLQ99685 303 aa11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 C8orf4Q9NR00 106 aa11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 HERV-K104P61576 105 aa11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 DAD1P61803 113 aa11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 OXA1LQ15070 435 aa11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 KCTD21Q4G0X4 260 aa11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 HOGA1Q86XE5 327 aa11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 CADM3Q8N126 398 aa11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 OR4A16Q8NH70 328 aa11.46□□□□□ -0.57
CTDNEP1-211ENST00000575783 SCGNO76038 276 aa11.45□□□□□ -0.58
CTDNEP1-211ENST00000575783 SPINK9Q5DT21 86 aa11.45□□□□□ -0.58
CTDNEP1-211ENST00000575783 BORCS5Q969J3 196 aa11.45□□□□□ -0.58
CTDNEP1-211ENST00000575783 YTHDF2Q9Y5A9 579 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-211ENST00000575783 RPS10-NUDT3A0A1W2PQS6 291 aa11.44□□□□□ -0.58
CTDNEP1-211ENST00000575783 FAM90A26D6RGX4 464 aa11.44□□□□□ -0.58
CTDNEP1-211ENST00000575783 NUDT3O95989 172 aa11.44□□□□□ -0.58
CTDNEP1-211ENST00000575783 AP2S1P53680 142 aaPredicted RBP11.44□□□□□ -0.58
CTDNEP1-211ENST00000575783 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
CTDNEP1-211ENST00000575783 OGFRL1Q5TC84 451 aaPredicted RBP11.44□□□□□ -0.58
CTDNEP1-211ENST00000575783 LGALS14Q8TCE9 139 aa11.44□□□□□ -0.58
CTDNEP1-211ENST00000575783 TRAV18A0A075B6X5 111 aa11.43□□□□□ -0.58
CTDNEP1-211ENST00000575783 LOC102723971A0A1B0GUV8 181 aa11.43□□□□□ -0.58
CTDNEP1-211ENST00000575783 RGS10O43665 173 aa11.43□□□□□ -0.58
CTDNEP1-211ENST00000575783 HLA-DRB4P13762 266 aa11.43□□□□□ -0.58
CTDNEP1-211ENST00000575783 SNCAP37840 140 aa11.43□□□□□ -0.58
CTDNEP1-211ENST00000575783 HSPE1P61604 102 aaKnown RBP11.43□□□□□ -0.58
CTDNEP1-211ENST00000575783 OR5AP2Q8NGF4 316 aa11.43□□□□□ -0.58
CTDNEP1-211ENST00000575783 HLA-DRB4X5D2U9 266 aa11.43□□□□□ -0.58
CTDNEP1-211ENST00000575783 HBE1P02100 147 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 CCL18P55774 89 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 DEFB1P60022 68 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 DLK1P80370 383 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 MLANAQ16655 118 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 GDF5OSQ5U4N7 250 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 Q5VSD8 79 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 C22orf42Q6IC83 251 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 C16orf54Q6UWD8 224 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 H2BFWTQ7Z2G1 175 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 C7orf50Q9BRJ6 194 aaKnown RBP11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 MRPL36Q9P0J6 103 aaKnown RBP11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 DAPK2Q9UIK4 370 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 TPRKBQ9Y3C4 175 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 VPS13BQ7Z7G8 4022 aa11.42□□□□□ -0.58
CTDNEP1-211ENST00000575783 CLN5O75503 358 aa11.41□□□□□ -0.58
CTDNEP1-211ENST00000575783 TIGITQ495A1 244 aa11.41□□□□□ -0.58
CTDNEP1-211ENST00000575783 CMTM1Q8IZ96 169 aa11.41□□□□□ -0.58
CTDNEP1-211ENST00000575783 GLMPQ8WWB7 406 aa11.41□□□□□ -0.58
CTDNEP1-211ENST00000575783 ZNF2Q9BSG1 426 aaPredicted RBP11.41□□□□□ -0.58
CTDNEP1-211ENST00000575783 EHFQ9NZC4 300 aa11.41□□□□□ -0.58
CTDNEP1-211ENST00000575783 LINC00588Q9Y4M8 146 aa11.41□□□□□ -0.58
CTDNEP1-211ENST00000575783 MEIS3P1A6NDR6 274 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 NOTOA8MTQ0 251 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 LYPD1Q8N2G4 141 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 FRZBQ92765 325 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 SEC22AQ96IW7 307 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 C18orf15Q96N68 181 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 DUSP21Q9H596 190 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 RHBDL2Q9NX52 303 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 U3KQE9 123 aa11.4□□□□□ -0.58
CTDNEP1-211ENST00000575783 TRDV1A0A1B0GX56 115 aa11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 SCGB2A1O75556 95 aa11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 HNRNPCP07910 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 NKX2-1P43699 371 aaPredicted RBP11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 RFX2P48378 723 aa11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 DHRS11Q6UWP2 260 aa11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 LINC00052Q96N35 136 aa11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 SLC35B3Q9H1N7 401 aa11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 Q9H8V8 135 aa11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 SEPSECSQ9HD40 501 aaKnown RBP11.39□□□□□ -0.59
CTDNEP1-211ENST00000575783 F5H768 121 aa11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 IGKV1-17P01599 117 aa11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 OPRK1P41145 380 aa11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 HOXA1P49639 335 aaPredicted RBP11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 IZUMO4Q1ZYL8 232 aa11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 C1orf158Q8N1D5 194 aa11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 ZNF709Q8N972 641 aa11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 OR4X1Q8NH49 305 aa11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 FNDC4Q9H6D8 234 aaPredicted RBP11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
CTDNEP1-211ENST00000575783 GPR31O00270 319 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 PMP2P02689 132 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 SUB1P53999 127 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 XGP55808 180 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 CLINT1Q14677 625 aa11.37□□□□□ -0.59
CTDNEP1-211ENST00000575783 SIGLEC15Q6ZMC9 328 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms