RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 METTL15P1P0C7V9 234 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 HIST1H1BP16401 226 aaKnown RBP10.5□□□□□ -0.73
LINC01996-201ENST00000573270 CXCL2P19875 107 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 S100A1P23297 94 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 RAB9AP51151 201 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 SUB1P53999 127 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC01996-201ENST00000573270 ATP5IP56385 69 aaPredicted RBP10.5□□□□□ -0.73
LINC01996-201ENST00000573270 FAM223AQ8IWN6 122 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 COMMD1Q8N668 190 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 RNF152Q8N8N0 203 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 MYOZ3Q8TDC0 251 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 SCARB1Q8WTV0 552 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 GNB4Q9HAV0 340 aa10.5□□□□□ -0.73
LINC01996-201ENST00000573270 LYRM2Q9NU23 88 aaPredicted RBP10.5□□□□□ -0.73
LINC01996-201ENST00000573270 FAM24AA6NFZ4 105 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 K7EIM0 57 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 BRI3O95415 125 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 MT-CO2P00403 227 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 IGHV3-48P01763 117 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 IFNA4P05014 189 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 OPRK1P41145 380 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 ZNF266Q14584 549 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 KLK9Q2XQG4 91 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 C15orf32Q32M92 178 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 PVRIGQ6DKI7 326 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 OR8G2PQ6IF36 304 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 TMEM14EPQ6UXP3 125 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 C18orf65Q6ZTR6 163 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 STX12Q86Y82 276 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 NECAP1Q8NC96 275 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 OR1L6Q8NGR2 347 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 OR5B12Q96R08 314 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 CITED2Q99967 270 aaPredicted RBP10.49□□□□□ -0.73
LINC01996-201ENST00000573270 ZNF471Q9BX82 626 aaPredicted RBP10.49□□□□□ -0.73
LINC01996-201ENST00000573270 SLC25A32Q9H2D1 315 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 KLK9Q9UKQ9 250 aa10.49□□□□□ -0.73
LINC01996-201ENST00000573270 TCRBV4S1A1TA0A5B7 111 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 PRSS46E5RG02 174 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 I3L2K1 104 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 CORTO00230 105 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 DFFBO76075 338 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 RAB11AP62491 216 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 HBG1P69891 147 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 HBG2P69892 147 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 IFITM2Q01629 132 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 ETV3LQ6ZN32 361 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 SLC16A13Q7RTY0 426 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 HAPLN4Q86UW8 402 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 STOML3Q8TAV4 291 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 CCDC140Q96MF4 163 aa10.48□□□□□ -0.73
LINC01996-201ENST00000573270 FNDC4Q9H6D8 234 aaPredicted RBP10.48□□□□□ -0.73
LINC01996-201ENST00000573270 PMS2P5A8MQ11 134 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 NUDT19A8MXV4 375 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 CST7O76096 145 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 EWSR1Q01844 656 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC01996-201ENST00000573270 ATP5G2Q06055 141 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 ARL16Q0P5N6 197 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 KIAA0141Q14154 515 aaPredicted RBP10.47□□□□□ -0.73
LINC01996-201ENST00000573270 C12orf54Q6X4T0 127 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 BAP18Q8IXM2 172 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 ZNF491Q8N8L2 437 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 KLHL30-AS1Q8NEE0 82 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
LINC01996-201ENST00000573270 EEF1AKMT3Q96AZ1 226 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 MDFIQ99750 246 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 THYN1Q9P016 225 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 MRPL36Q9P0J6 103 aaKnown RBP10.47□□□□□ -0.73
LINC01996-201ENST00000573270 STAB1Q9NY15 2570 aa10.47□□□□□ -0.73
LINC01996-201ENST00000573270 ADARB2-AS1A8MUL3 147 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 TRBV12-3P01733 135 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 LGALS1P09382 135 aaKnown RBP10.46□□□□□ -0.73
LINC01996-201ENST00000573270 RAB5CP51148 216 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 SLC38A11Q08AI6 406 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 ATP6V1FQ16864 119 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 DEFB136Q30KP8 78 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 NSUN5P1Q3KNT7 163 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 CLLU1Q5K131 121 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 ACSM6Q6P461 480 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 TMEM252Q8N6L7 170 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 UBAC2Q8NBM4 344 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 RNF141Q8WVD5 230 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 BSCL2Q96G97 398 aaPredicted RBP10.46□□□□□ -0.73
LINC01996-201ENST00000573270 CITED1Q99966 193 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 C21orf62Q9NYP8 219 aa10.46□□□□□ -0.73
LINC01996-201ENST00000573270 TSSC4Q9Y5U2 329 aaPredicted RBP10.46□□□□□ -0.73
LINC01996-201ENST00000573270 A0A0G2JLM5 398 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 RPS10-NUDT3A0A1W2PQS6 291 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 ANKRD34BA5PLL1 514 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 IFNA5P01569 189 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 GPR183P32249 361 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 SULT1A1P50225 295 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 CD69Q07108 199 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 MLANAQ16655 118 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 Q56UQ5 140 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 C8orf86Q6ZUL3 223 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 LILRB2Q8N423 598 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 TMEM217Q8N7C4 229 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 SPATA3Q8NHX4 192 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 ZNF502Q8TBZ5 544 aa10.45□□□□□ -0.74
LINC01996-201ENST00000573270 VN1R17PQ8TDU5 208 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms