RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 APELAP0DMC3 54 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 RND2P52198 227 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 FGF8P55075 233 aaPredicted RBP15.4■□□□□ 0.06
RPAIN-210ENST00000571613 FBLN7Q53RD9 439 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 RBM14Q96PK6 669 aaKnown RBP15.4■□□□□ 0.06
RPAIN-210ENST00000571613 TRGV9Q99603 122 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 SLC25A33Q9BSK2 321 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 THYN1Q9P016 225 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 VAX2Q9UIW0 290 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 MOB4Q9Y3A3 225 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 PLXNB1O43157 2135 aa15.4■□□□□ 0.06
RPAIN-210ENST00000571613 CHD6Q8TD26 2715 aa15.39■□□□□ 0.05
RPAIN-210ENST00000571613 IGHV7-81A0A0B4J1V7 117 aa15.39■□□□□ 0.05
RPAIN-210ENST00000571613 RARRES2Q99969 163 aa15.39■□□□□ 0.05
RPAIN-210ENST00000571613 PITPNC1Q9UKF7 332 aa15.39■□□□□ 0.05
RPAIN-210ENST00000571613 C9JQL5 133 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 SNAPINO95295 136 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 CXorf1O96002 111 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 STAG3L2P0CL84 134 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 STAG3L3P0CL85 134 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 ADCYAP1P18509 176 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 ICAM4Q14773 271 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 GCSAMLQ5JQS6 135 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 OR1L4Q8NGR5 311 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 GATAD1Q8WUU5 269 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 PFDN5Q99471 154 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 SSX3Q99909 188 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 I3L2K1 104 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 OR4X1Q8NH49 305 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 SGMS2Q8NHU3 365 aa15.38■□□□□ 0.05
RPAIN-210ENST00000571613 FAM103A1Q9BTL3 118 aaKnown RBP15.38■□□□□ 0.05
RPAIN-210ENST00000571613 M0QZK8 103 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 FABP1P07148 127 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 IGHV4-31P0DP07 118 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 HIST1H1BP16401 226 aaKnown RBP15.37■□□□□ 0.05
RPAIN-210ENST00000571613 KLF17Q5JT82 389 aaPredicted RBP15.37■□□□□ 0.05
RPAIN-210ENST00000571613 SOHLH1Q5JUK2 328 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 C5orf56Q8N8D9 126 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 RXFP4Q8TDU9 374 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 Q96MF0 132 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 MRPL32Q9BYC8 188 aaKnown RBP15.37■□□□□ 0.05
RPAIN-210ENST00000571613 TNFRSF19Q9NS68 423 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 PTPN13Q12923 2485 aa15.37■□□□□ 0.05
RPAIN-210ENST00000571613 SRP19P09132 144 aaKnown RBP15.36■□□□□ 0.05
RPAIN-210ENST00000571613 TAS2R45P59539 299 aa15.36■□□□□ 0.05
RPAIN-210ENST00000571613 NDPQ00604 133 aa15.36■□□□□ 0.05
RPAIN-210ENST00000571613 C16orf82Q7Z2V1 217 aa15.36■□□□□ 0.05
RPAIN-210ENST00000571613 TXNDC17Q9BRA2 123 aa15.36■□□□□ 0.05
RPAIN-210ENST00000571613 FUT9Q9Y231 359 aa15.36■□□□□ 0.05
RPAIN-210ENST00000571613 DMRT1Q9Y5R6 373 aa15.36■□□□□ 0.05
RPAIN-210ENST00000571613 NAV3Q8IVL0 2385 aa15.36■□□□□ 0.05
RPAIN-210ENST00000571613 IGKV1D-37A0A075B6S9 117 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 HMGB3O15347 200 aaKnown RBP15.35■□□□□ 0.05
RPAIN-210ENST00000571613 OR5G3P0C626 314 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 ASPHD1Q5U4P2 390 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 FAM78BQ5VT40 261 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 IQCF2Q8IXL9 164 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 PIFOQ8TCI5 191 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 DNAJC4Q9NNZ3 241 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 ANKRD17O75179 2603 aaKnown RBP15.35■□□□□ 0.05
RPAIN-210ENST00000571613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.35■□□□□ 0.051e-8■■■□□ 16.6
RPAIN-210ENST00000571613 IGLV11-55A0A075B6I3 123 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 ELOA3CA0A087WX78 387 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-210ENST00000571613 AVPP01185 164 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 CYB5R2Q6BCY4 276 aa15.35■□□□□ 0.05
RPAIN-210ENST00000571613 TECRQ9NZ01 308 aaKnown RBP15.35■□□□□ 0.05
RPAIN-210ENST00000571613 TRAV30A0A087WSZ9 112 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 K7EIM0 57 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 SCGB2A1O75556 95 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 NPBWR1P48145 328 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 MEF2BQ02080 365 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-210ENST00000571613 AKIRIN2Q53H80 203 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 SPNS3Q6ZMD2 512 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 TEX29Q8N6K0 151 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 FAM110DQ8TAY7 271 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-210ENST00000571613 SUN5Q8TC36 379 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 ZNF48Q96MX3 618 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-210ENST00000571613 NKX6-2Q9C056 277 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-210ENST00000571613 SEPSECSQ9HD40 501 aaKnown RBP15.34■□□□□ 0.05
RPAIN-210ENST00000571613 MRPL36Q9P0J6 103 aaKnown RBP15.34■□□□□ 0.05
RPAIN-210ENST00000571613 DOPEY2Q9Y3R5 2298 aa15.34■□□□□ 0.05
RPAIN-210ENST00000571613 COX7A2P2O60397 106 aa15.33■□□□□ 0.04
RPAIN-210ENST00000571613 CLN5O75503 358 aa15.33■□□□□ 0.04
RPAIN-210ENST00000571613 IGHV3-48P01763 117 aa15.33■□□□□ 0.04
RPAIN-210ENST00000571613 EGR2P11161 476 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-210ENST00000571613 KLK9Q2XQG4 91 aa15.33■□□□□ 0.04
RPAIN-210ENST00000571613 PQLC2Q6ZP29 291 aa15.33■□□□□ 0.04
RPAIN-210ENST00000571613 C19orf35Q6ZS72 473 aa15.33■□□□□ 0.04
RPAIN-210ENST00000571613 KLK9Q9UKQ9 250 aa15.33■□□□□ 0.04
RPAIN-210ENST00000571613 A6NDX4 124 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 ARL14EPLP0DKL9 152 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 GATA2P23769 480 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-210ENST00000571613 GUCA2BQ16661 112 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 KRTAP1-3Q8IUG1 177 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 FANCD2OSQ96PS1 177 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 HSPB9Q9BQS6 159 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 TMUB1Q9BVT8 246 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 TMPRSS5Q9H3S3 457 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 TMEM167BQ9NRX6 74 aa15.32■□□□□ 0.04
RPAIN-210ENST00000571613 ARL2-SNX15V9GYD0 113 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms