RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 BTCP35070 178 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 TFPI2P48307 235 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 SMCO1Q147U7 214 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 DEFB114Q30KQ6 69 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 LCN12Q6JVE5 192 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 CADM3Q8N126 398 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 DUSP18Q8NEJ0 188 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 OR1L6Q8NGR2 347 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 BSCL2Q96G97 398 aaPredicted RBP6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 SLC25A21Q9BQT8 299 aaPredicted RBP6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 HIPK2Q9H2X6 1198 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 PALMDQ9NP74 551 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 UBQLN2Q9UHD9 624 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 DNAH9Q9NYC9 4486 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 A0A0B4J2A0 478 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 C9orf170A2RU37 121 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 NAP1L6A6NFF2 107 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 MPTX1A8MV57 137 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 LGALS9O00182 355 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 PLA2G10O15496 165 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 LYRM1O43325 122 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 SCGB1D2O95969 90 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 FRMD6-AS1P0C7T7 363 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 IGHV4-30-4P0DP06 118 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 TNFRSF9Q07011 255 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 TIGITQ495A1 244 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 NMSQ5H8A3 153 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 GGNBP1Q5YKI7 109 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 RBPMS2Q6ZRY4 209 aaKnown RBP6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 GTSCR1Q86UQ5 136 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 TMEM61Q8N0U2 210 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 Q8N1Y9 231 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 DEFB125Q8N687 156 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 ZNF114Q8NC26 417 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 SLC24A4Q8NFF2 622 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 DTD1Q8TEA8 209 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 ACY3Q96HD9 319 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 FNDC4Q9H6D8 234 aaPredicted RBP6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 TUBA4BQ9H853 241 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 SHPKQ9UHJ6 478 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 UFC1Q9Y3C8 167 aa6.81□□□□□ -1.32
GTF3C1-210ENST00000569394 ZNF785A8K8V0 405 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 WRBO00258 174 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 CCSO14618 274 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 IFNA4P05014 189 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 OR4E1P0C645 316 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 NPY1RP25929 384 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 HTR2BP41595 481 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 RND2P52198 227 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 SRPXP78539 464 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 C21orf62-AS1Q17RA5 79 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 KLK9Q2XQG4 91 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 WFDC3Q8IUB2 231 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 SBSPONQ8IVN8 264 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 GBGT1Q8N5D6 347 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 TMEM170AQ8WVE7 144 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 TMEM190Q8WZ59 177 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 IL22RA2Q969J5 263 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 B9D2Q9BPU9 175 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 NEURL2Q9BR09 285 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 ZNF436Q9C0F3 470 aaPredicted RBP6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 C20orf85Q9H1P6 137 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 KLK9Q9UKQ9 250 aa6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 PUS1Q9Y606 427 aaKnown RBP eCLIP6.8□□□□□ -1.32
GTF3C1-210ENST00000569394 A0A1B0GU03 582 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 FAM25EA8MYX2 175 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 H3BP45 60 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 NDUFA4O00483 81 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 TMEM50AO95807 157 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 APOHP02749 345 aaPredicted RBP6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 NPBWR1P48145 328 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 RPL11P62913 178 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 RELQ04864 619 aaPredicted RBP6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 DHRS2Q13268 280 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 SPSB3Q6PJ21 355 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 TOMM20LQ6UXN7 152 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 LYG2Q86SG7 212 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 OR52E5Q8NH55 327 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 COQ8AQ8NI60 647 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 ZNF414Q96IQ9 312 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 SEC22CQ9BRL7 303 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 MRPL27Q9P0M9 148 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 GSKIPQ9P0R6 139 aa6.79□□□□□ -1.32
GTF3C1-210ENST00000569394 TRAV14DV4A0A0A6YYC5 116 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 FAM240BA0A1B0GVZ2 78 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 A8MWP6 167 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 OR11H12B2RN74 326 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 CORTO00230 105 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 TCRBP04435 133 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 DCTN2Q13561 401 aaKnown RBP6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 ZNF846Q147U1 533 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 C2orf83Q53S99 150 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 SPANXN5Q5MJ07 72 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 PRSS54Q6PEW0 395 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 GSG1LQ6UXU4 331 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 TMEM116Q8NCL8 245 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 DEDD2Q8WXF8 326 aa6.78□□□□□ -1.32
GTF3C1-210ENST00000569394 S100ZQ8WXG8 99 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms