RNA–Protein interactions for RNA: ENST00000568139.5

CLK3-221, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-221ENST00000568139 RTL8CO15255 209 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 ZNF688P0C7X2 276 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 HLA-DMAP28067 261 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 PRSS3P35030 304 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 UCP3P55916 312 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 C12orf74Q32Q52 190 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 SPINK9Q5DT21 86 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 CROCCP3Q8IVE0 287 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 METTL26Q96S19 204 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 CLEC5AQ9NY25 188 aa12.68□□□□□ -0.38
CLK3-221ENST00000568139 P0DMU3 169 aa12.67□□□□□ -0.38
CLK3-221ENST00000568139 FAM231AP0DMU4 169 aa12.67□□□□□ -0.38
CLK3-221ENST00000568139 FAM231CP0DMU5 169 aa12.67□□□□□ -0.38
CLK3-221ENST00000568139 SNCAP37840 140 aa12.67□□□□□ -0.38
CLK3-221ENST00000568139 P2RY1P47900 373 aa12.67□□□□□ -0.38
CLK3-221ENST00000568139 TSPAN5P62079 268 aa12.67□□□□□ -0.38
CLK3-221ENST00000568139 IZUMO4Q1ZYL8 232 aa12.67□□□□□ -0.38
CLK3-221ENST00000568139 ACTL10Q5JWF8 245 aa12.67□□□□□ -0.38
CLK3-221ENST00000568139 MRPL36Q9P0J6 103 aaKnown RBP12.67□□□□□ -0.38
CLK3-221ENST00000568139 DNAH17Q9UFH2 4485 aa12.66□□□□□ -0.38
CLK3-221ENST00000568139 CORTO00230 105 aa12.66□□□□□ -0.38
CLK3-221ENST00000568139 CLN5O75503 358 aa12.66□□□□□ -0.38
CLK3-221ENST00000568139 P0C879 139 aa12.66□□□□□ -0.38
CLK3-221ENST00000568139 RNASE2P10153 161 aaKnown RBP12.66□□□□□ -0.38
CLK3-221ENST00000568139 PPP5CP53041 499 aa12.66□□□□□ -0.38
CLK3-221ENST00000568139 KCTD21Q4G0X4 260 aa12.66□□□□□ -0.38
CLK3-221ENST00000568139 SAMD12Q8N8I0 201 aa12.66□□□□□ -0.38
CLK3-221ENST00000568139 GPX8Q8TED1 209 aa12.66□□□□□ -0.38
CLK3-221ENST00000568139 FNDC4Q9H6D8 234 aaPredicted RBP12.66□□□□□ -0.38
CLK3-221ENST00000568139 A0A0B4J293 547 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 IGKV1-5P01602 117 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 SUB1P53999 127 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLK3-221ENST00000568139 MLANAQ16655 118 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 ZNF767PQ75MW2 155 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 SLC35G3Q8N808 338 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 OR4X1Q8NH49 305 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 RAB40CQ96S21 281 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 NDUFAF3Q9BU61 184 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 U3KQE9 123 aa12.65□□□□□ -0.38
CLK3-221ENST00000568139 M0R2N4 97 aa12.64□□□□□ -0.39
CLK3-221ENST00000568139 TGFBR1P36897 503 aa12.64□□□□□ -0.39
CLK3-221ENST00000568139 RPL5P46777 297 aaKnown RBP12.64□□□□□ -0.39
CLK3-221ENST00000568139 TMEM230Q96A57 120 aa12.64□□□□□ -0.39
CLK3-221ENST00000568139 NARS2Q96I59 477 aaKnown RBP12.64□□□□□ -0.39
CLK3-221ENST00000568139 SCRT1Q9BWW7 348 aa12.64□□□□□ -0.39
CLK3-221ENST00000568139 IFNA17P01571 189 aa12.63□□□□□ -0.39
CLK3-221ENST00000568139 IGKV1-17P01599 117 aa12.63□□□□□ -0.39
CLK3-221ENST00000568139 RPS19P39019 145 aaKnown RBP12.63□□□□□ -0.39
CLK3-221ENST00000568139 RND3P61587 244 aa12.63□□□□□ -0.39
CLK3-221ENST00000568139 DHRS2Q13268 280 aa12.63□□□□□ -0.39
CLK3-221ENST00000568139 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
CLK3-221ENST00000568139 NPY1RP25929 384 aa12.62□□□□□ -0.39
CLK3-221ENST00000568139 OPRK1P41145 380 aa12.62□□□□□ -0.39
CLK3-221ENST00000568139 EIF2B2P49770 351 aaKnown RBP12.62□□□□□ -0.39
CLK3-221ENST00000568139 NEDD8Q15843 81 aa12.62□□□□□ -0.39
CLK3-221ENST00000568139 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
CLK3-221ENST00000568139 C16orf54Q6UWD8 224 aa12.62□□□□□ -0.39
CLK3-221ENST00000568139 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
CLK3-221ENST00000568139 C1QTNF4Q9BXJ3 329 aa12.62□□□□□ -0.39
CLK3-221ENST00000568139 TRAV30A0A087WSZ9 112 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 HELTA6NFD8 242 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 ETV6P41212 452 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 AP2S1P53680 142 aaPredicted RBP12.61□□□□□ -0.39
CLK3-221ENST00000568139 NUTF2P61970 127 aaKnown RBP12.61□□□□□ -0.39
CLK3-221ENST00000568139 BSXQ3C1V8 233 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 TIGITQ495A1 244 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 TP53RKQ96S44 253 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 PDCD10Q9BUL8 212 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 Q9H521 79 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 SCPEP1Q9HB40 452 aa12.61□□□□□ -0.39
CLK3-221ENST00000568139 DYNC1H1Q14204 4646 aaKnown RBP12.6□□□□□ -0.39
CLK3-221ENST00000568139 CD74P04233 296 aa12.6□□□□□ -0.39
CLK3-221ENST00000568139 RCVRNP35243 200 aa12.6□□□□□ -0.39
CLK3-221ENST00000568139 HOXA1P49639 335 aaPredicted RBP12.6□□□□□ -0.39
CLK3-221ENST00000568139 AKR1C2P52895 323 aa12.6□□□□□ -0.39
CLK3-221ENST00000568139 ZNF486Q96H40 463 aaPredicted RBP12.6□□□□□ -0.39
CLK3-221ENST00000568139 NEU1Q99519 415 aa12.6□□□□□ -0.39
CLK3-221ENST00000568139 SEPSECSQ9HD40 501 aaKnown RBP12.6□□□□□ -0.39
CLK3-221ENST00000568139 ENY2Q9NPA8 101 aa12.6□□□□□ -0.39
CLK3-221ENST00000568139 XCL2Q9UBD3 114 aa12.6□□□□□ -0.39
CLK3-221ENST00000568139 H3BMM0 161 aa12.59□□□□□ -0.39
CLK3-221ENST00000568139 ATG12O94817 140 aa12.59□□□□□ -0.39
CLK3-221ENST00000568139 HNRNPCP07910 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLK3-221ENST00000568139 PIGPP57054 158 aa12.59□□□□□ -0.39
CLK3-221ENST00000568139 Q6ZR54 194 aa12.59□□□□□ -0.39
CLK3-221ENST00000568139 DNAH11Q96DT5 4516 aa12.59□□□□□ -0.39
CLK3-221ENST00000568139 PKD1P98161 4303 aa12.59□□□□□ -0.39
CLK3-221ENST00000568139 FAM90A26D6RGX4 464 aa12.58□□□□□ -0.4
CLK3-221ENST00000568139 IGLC1P0CG04 106 aa12.58□□□□□ -0.4
CLK3-221ENST00000568139 PGAM2P15259 253 aa12.58□□□□□ -0.4
CLK3-221ENST00000568139 PI3P19957 117 aa12.58□□□□□ -0.4
CLK3-221ENST00000568139 YPEL3P61236 119 aaPredicted RBP12.58□□□□□ -0.4
CLK3-221ENST00000568139 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
CLK3-221ENST00000568139 ZNF705AQ6ZN79 300 aaPredicted RBP12.58□□□□□ -0.4
CLK3-221ENST00000568139 LHFPL1Q86WI0 220 aa12.58□□□□□ -0.4
CLK3-221ENST00000568139 SNX29P2Q8IUI4 249 aa12.58□□□□□ -0.4
CLK3-221ENST00000568139 OR1S2Q8NGQ3 325 aa12.58□□□□□ -0.4
CLK3-221ENST00000568139 A0A0G2JRQ6 117 aa12.57□□□□□ -0.4
CLK3-221ENST00000568139 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms