RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KPNA4O00629 521 aaPredicted RBP2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SH2D1AO60880 128 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF324O75467 553 aaPredicted RBP2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 WISP3O95389 354 aaPredicted RBP2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 APOA2P02652 100 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 PPBPP02775 128 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 IL4P05112 153 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 CSN2P05814 226 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SMIM10L2AP0DMW4 78 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SMIM10L2BP0DMW5 78 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 CA5AP35218 305 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 CSN1S1P47710 185 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 TSPEAR-AS2P59090 65 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 OR8G1Q15617 311 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF767PQ75MW2 155 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SPATA12Q7Z6I5 190 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 CROCCP2Q86T23 111 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 LINC00612Q8N6U2 182 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF709Q8N972 641 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF675Q8TD23 568 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SLC7A6Q92536 515 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 UBE2WQ96B02 151 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 MALSU1Q96EH3 234 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 IP6K3Q96PC2 410 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SERPINI1Q99574 410 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SPIN2AQ99865 258 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SPIN2BQ9BPZ2 258 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 C1QTNF6Q9BXI9 259 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 EFCAB1Q9HAE3 211 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 LRTM1Q9HBL6 345 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 OR5V1Q9UGF6 321 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 MCTS1Q9ULC4 181 aaKnown RBP2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 TRAPPC1Q9Y5R8 145 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 CPDO75976 1380 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 COL4A5P29400 1685 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 USP24Q9UPU5 2620 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 NUP205Q92621 2012 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 DOCK6Q96HP0 2047 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 C5P01031 1676 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 IGLV4-69A0A075B6H9 119 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 TRAV4A0A0B4J268 109 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 GGT3PA6NGU5 568 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 OR2J2O76002 312 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 CGAP01215 116 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 IGKV3-15P01624 115 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 SLC25A16P16260 332 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 AKR1C3P42330 323 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 PIGPP57054 158 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 DSCR10P59022 87 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 CKS1BP61024 79 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF616Q08AN1 781 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 EIF4EBP2Q13542 120 aaPredicted RBP2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 LGALSLQ3ZCW2 172 aaPredicted RBP2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 SCGB2B2Q4G0G5 96 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 MRPL51Q4U2R6 128 aaKnown RBP2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 C10orf91Q5T1B1 145 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 LYRM7Q5U5X0 104 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 RASL11AQ6T310 242 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 ZFP2Q6ZN57 461 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 SSX8Q7RTT4 187 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 DNAJC9Q8WXX5 260 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 TOMM6Q96B49 74 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 PYURFQ96I23 114 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 FOPNLQ96NB1 174 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 CCDC115Q96NT0 180 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 CHST6Q9GZX3 395 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 TP73-AS1Q9UF72 201 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 OR52A1Q9UKL2 312 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 PCTPQ9UKL6 214 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 PAIP2BQ9ULR5 123 aaKnown RBP2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 AMMECR1Q9Y4X0 333 aaPredicted RBP2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 LY75O60449 1722 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 CRYBG1Q9Y4K1 1723 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 ATG2BQ96BY7 2078 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 DOCK9Q9BZ29 2069 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF609O15014 1411 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 CASKIN1Q8WXD9 1431 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 DNAH12Q6ZR08 3092 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 NLRC5Q86WI3 1866 aa2.16□□□□□ -2.06
HERPUD1-211ENST00000566550 ABCA12Q86UK0 2595 aa2.15□□□□□ -2.06
HERPUD1-211ENST00000566550 SCN1AP35498 2009 aa2.15□□□□□ -2.06
HERPUD1-211ENST00000566550 AGRNO00468 2067 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 TRBV24-1A0A075B6N3 115 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 IGKV1D-43A0A0B4J1Z2 117 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 TRAV41A0A0B4J266 112 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 DUXBA0A1W2PPF3 345 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 TRAPPC2LH3BP13 241 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 J3QRK9 145 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 LECT2O14960 151 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 LHBP01229 141 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST1H2BOP23527 126 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 CASP1P29466 404 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST1H2BBP33778 126 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 G6PCP35575 357 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 MPV17P39210 176 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 GABRA2P47869 451 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 GTF2A1P52655 376 aaPredicted RBP2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST1H2BDP58876 126 aa2.15□□□□□ -2.07
HERPUD1-211ENST00000566550 HIST1H2BCP62807 126 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms