RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 DIDO1Q9BTC0 2240 aaKnown RBP17.57■□□□□ 0.4
SPSB3-208ENST00000566339 HYPMO75409 117 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 MGST1P10620 155 aaKnown RBP17.57■□□□□ 0.4
SPSB3-208ENST00000566339 PMCHP20382 165 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 BPIFB3P59826 476 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 FAM71F2Q6NXP2 309 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 ZNF833PQ6ZTB9 187 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 STXBP6Q8NFX7 210 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 C18orf32Q8TCD1 76 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 SLC25A2Q9BXI2 301 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 RNF114Q9Y508 228 aa17.57■□□□□ 0.4
SPSB3-208ENST00000566339 SOX21Q9Y651 276 aaPredicted RBP17.57■□□□□ 0.4
SPSB3-208ENST00000566339 NPSP0C0P6 89 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 UBE2L3P68036 154 aaKnown RBP17.56■□□□□ 0.4
SPSB3-208ENST00000566339 FXYD3Q14802 87 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 TBR1Q16650 682 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 RCHY1Q96PM5 261 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 NDUFA4L2Q9NRX3 87 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 C1RLQ9NZP8 487 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 LAMTOR2Q9Y2Q5 125 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 DSPP15924 2871 aaKnown RBP17.56■□□□□ 0.4
SPSB3-208ENST00000566339 MBD3L4A6NDZ8 208 aaPredicted RBP17.56■□□□□ 0.4
SPSB3-208ENST00000566339 MBD3L3A6NE82 208 aaPredicted RBP17.56■□□□□ 0.4
SPSB3-208ENST00000566339 MBD3L5A6NJ08 208 aaPredicted RBP17.56■□□□□ 0.4
SPSB3-208ENST00000566339 APOA2P02652 100 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 HIST1H1EP10412 219 aaKnown RBP17.56■□□□□ 0.4
SPSB3-208ENST00000566339 MBD3L2Q8NHZ7 208 aaPredicted RBP17.56■□□□□ 0.4
SPSB3-208ENST00000566339 VSTM2AQ8TAG5 236 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 ITLN1Q8WWA0 313 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 TXN2Q99757 166 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 SERTAD4Q9NUC0 356 aa17.56■□□□□ 0.4
SPSB3-208ENST00000566339 AMMECR1Q9Y4X0 333 aaPredicted RBP17.56■□□□□ 0.4
SPSB3-208ENST00000566339 hADV38S2A0JD32 116 aa17.55■□□□□ 0.4
SPSB3-208ENST00000566339 A6NNC1 897 aa17.55■□□□□ 0.4
SPSB3-208ENST00000566339 CHRNB4P30926 498 aa17.55■□□□□ 0.4
SPSB3-208ENST00000566339 SUB1P53999 127 aaKnown RBP eCLIP17.55■□□□□ 0.4
SPSB3-208ENST00000566339 TMEM177Q53S58 311 aa17.55■□□□□ 0.4
SPSB3-208ENST00000566339 MRPL54Q6P161 138 aaKnown RBP17.55■□□□□ 0.4
SPSB3-208ENST00000566339 ZNF788Q6ZQV5 615 aa17.55■□□□□ 0.4
SPSB3-208ENST00000566339 THAP8Q8NA92 274 aa17.55■□□□□ 0.4
SPSB3-208ENST00000566339 GAFA1Q96PS6 74 aa17.55■□□□□ 0.4
SPSB3-208ENST00000566339 ANKRD11Q6UB99 2663 aaPredicted RBP17.55■□□□□ 0.4
SPSB3-208ENST00000566339 PEX7O00628 323 aa17.54■□□□□ 0.4
SPSB3-208ENST00000566339 MSMPQ1L6U9 139 aa17.54■□□□□ 0.4
SPSB3-208ENST00000566339 Q6ZN92 141 aa17.54■□□□□ 0.4
SPSB3-208ENST00000566339 ZNF430Q9H8G1 570 aaPredicted RBP17.54■□□□□ 0.4
SPSB3-208ENST00000566339 LINC00312Q9Y6C7 94 aa17.54■□□□□ 0.4
SPSB3-208ENST00000566339 YLPM1P49750 1951 aaKnown RBP17.54■□□□□ 0.4
SPSB3-208ENST00000566339 SAA1P0DJI8 122 aaPredicted RBP17.53■□□□□ 0.4
SPSB3-208ENST00000566339 CA7P43166 264 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 MEF2CQ06413 473 aaPredicted RBP17.53■□□□□ 0.4
SPSB3-208ENST00000566339 KIAA1644Q3SXP7 199 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 CT83Q5H943 113 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 TEX36Q5VZQ5 186 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 SPACA3Q8IXA5 215 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 OR9G1Q8NH87 305 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 PAXXQ9BUH6 204 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 IGHV3-7P01780 117 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 TNFSF4P23510 183 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 TCL1AP56279 114 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 ZNF329Q86UD4 541 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 OR8B3Q8NGG8 313 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 TMEM167AQ8TBQ9 72 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 LEAP2Q969E1 77 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 OR8B2Q96RD0 313 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 GAL3ST2Q9H3Q3 398 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 CACNA1DQ01668 2161 aa17.53■□□□□ 0.4
SPSB3-208ENST00000566339 TRAV9-2A0A087WT02 112 aa17.52■□□□□ 0.4
SPSB3-208ENST00000566339 TCRBV4S1A1TA0A5B7 111 aa17.52■□□□□ 0.4
SPSB3-208ENST00000566339 COX7A2P2O60397 106 aa17.52■□□□□ 0.4
SPSB3-208ENST00000566339 HSBP1O75506 76 aa17.52■□□□□ 0.4
SPSB3-208ENST00000566339 C10orf113Q5VZT2 155 aa17.52■□□□□ 0.4
SPSB3-208ENST00000566339 C8orf31Q8N9H6 132 aa17.52■□□□□ 0.4
SPSB3-208ENST00000566339 ACACAQ13085 2346 aa17.52■□□□□ 0.39
SPSB3-208ENST00000566339 SRRM4A7MD48 611 aaKnown RBP17.51■□□□□ 0.39
SPSB3-208ENST00000566339 SPINK4O60575 86 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 MYOD1P15172 320 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 MYCNOSP40205 109 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 RPL8P62917 257 aaKnown RBP17.51■□□□□ 0.39
SPSB3-208ENST00000566339 BATFQ16520 125 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 C11orf42Q8N5U0 333 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 OR5AN1Q8NGI8 311 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 IGHV2-26A0A0B4J1V2 119 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 SLAQ13239 276 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 MMDQ15546 238 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 NUP35Q8NFH5 326 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 NUDT10Q8NFP7 164 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 OR2D3Q8NGH3 330 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 NUDT11Q96G61 164 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 ALKBH7Q9BT30 221 aaPredicted RBP17.51■□□□□ 0.39
SPSB3-208ENST00000566339 KLF12Q9Y4X4 402 aa17.51■□□□□ 0.39
SPSB3-208ENST00000566339 APC2O95996 2303 aa17.5■□□□□ 0.39
SPSB3-208ENST00000566339 A0A1B0GXF2 115 aa17.5■□□□□ 0.39
SPSB3-208ENST00000566339 SIAH2O43255 324 aa17.5■□□□□ 0.39
SPSB3-208ENST00000566339 SPRY3O43610 288 aa17.5■□□□□ 0.39
SPSB3-208ENST00000566339 MFAP2P55001 183 aa17.5■□□□□ 0.39
SPSB3-208ENST00000566339 UTF1Q5T230 341 aa17.5■□□□□ 0.39
SPSB3-208ENST00000566339 PDPNQ86YL7 162 aa17.5■□□□□ 0.39
SPSB3-208ENST00000566339 CLEC7AQ9BXN2 247 aa17.5■□□□□ 0.39
SPSB3-208ENST00000566339 C7orf69Q9H7B7 122 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms