RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 FAM208AQ9UK61 1670 aaKnown RBP1.44□□□□□ -2.18
CHD9-215ENST00000565442 LRRC7Q96NW7 1537 aa1.44□□□□□ -2.18
CHD9-215ENST00000565442 ROCK1Q13464 1354 aa1.44□□□□□ -2.18
CHD9-215ENST00000565442 TONSLQ96HA7 1378 aa1.44□□□□□ -2.18
CHD9-215ENST00000565442 MED13Q9UHV7 2174 aa1.44□□□□□ -2.18
CHD9-215ENST00000565442 LRRC37A3O60309 1634 aa1.44□□□□□ -2.18
CHD9-215ENST00000565442 LRP6O75581 1613 aa1.44□□□□□ -2.18
CHD9-215ENST00000565442 GLI3P10071 1580 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 SPEF2Q9C093 1822 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 DCCP43146 1447 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 TRBV20OR9-2A0A075B6H5 130 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.43□□□□□ -2.18
CHD9-215ENST00000565442 TRBV6-5A0A0K0K1A5 114 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 OR51F1A6NGY5 319 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 NOS1APO75052 506 aaPredicted RBP1.43□□□□□ -2.18
CHD9-215ENST00000565442 NIPSNAP2O75323 286 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 IGHV3-7P01780 117 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 AKR1C3P42330 323 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 NKX2-5P52952 324 aaPredicted RBP1.43□□□□□ -2.18
CHD9-215ENST00000565442 GRK1Q15835 563 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 FAM173BQ6P4H8 233 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 ALKAL1Q6UXT8 129 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 FP248Q71RG6 208 aaPredicted RBP1.43□□□□□ -2.18
CHD9-215ENST00000565442 ARL5BQ96KC2 179 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 PARD6GQ9BYG4 376 aaPredicted RBP1.43□□□□□ -2.18
CHD9-215ENST00000565442 EFCAB1Q9HAE3 211 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 CISHQ9NSE2 258 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 CMTM6Q9NX76 183 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 IL36BQ9NZH7 164 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 SLIT1O75093 1534 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 ROCK2O75116 1388 aaKnown RBP1.43□□□□□ -2.18
CHD9-215ENST00000565442 NWD2Q9ULI1 1742 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 PXDNQ92626 1479 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 NLRP1Q9C000 1473 aa1.43□□□□□ -2.18
CHD9-215ENST00000565442 MAP2P11137 1827 aaKnown RBP1.43□□□□□ -2.18
CHD9-215ENST00000565442 USP54Q70EL1 1684 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 LMO7Q8WWI1 1683 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 CNTLNQ9NXG0 1405 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 MYH11P35749 1972 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 MEIKINA0A087WXM9 373 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 A0A1B0GV50 99 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 EEF1E1-BLOC1S5C9J1V9 151 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 KCNK1O00180 336 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 SLC22A1O15245 554 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 HIST1H1EP10412 219 aaKnown RBP1.42□□□□□ -2.18
CHD9-215ENST00000565442 RPL18Q07020 188 aaKnown RBP1.42□□□□□ -2.18
CHD9-215ENST00000565442 NNATQ16517 81 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 ARHGAP11BQ3KRB8 267 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 CCDC122Q5T0U0 273 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 PTRHD1Q6GMV3 140 aaKnown RBP1.42□□□□□ -2.18
CHD9-215ENST00000565442 TMEM86BQ8N661 226 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 SLC35B4Q969S0 331 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 KIF24Q5T7B8 1368 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 KIF1AQ12756 1690 aa1.42□□□□□ -2.18
CHD9-215ENST00000565442 RALGAPA2Q2PPJ7 1873 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 BLMP54132 1417 aaPredicted RBP1.41□□□□□ -2.18
CHD9-215ENST00000565442 NSD3Q9BZ95 1437 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 YTHDC2Q9H6S0 1430 aaKnown RBP1.41□□□□□ -2.18
CHD9-215ENST00000565442 NFAT5O94916 1531 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 PAPPAQ13219 1627 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 TJP1Q07157 1748 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 PKD1L3Q7Z443 1732 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 TNS1Q9HBL0 1735 aaKnown RBP1.41□□□□□ -2.18
CHD9-215ENST00000565442 TRBV10-2A0A0K0K1G8 114 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 EIF2B2P49770 351 aaKnown RBP1.41□□□□□ -2.18
CHD9-215ENST00000565442 SPCS3P61009 180 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 C9orf163Q8N9P6 203 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 MBD3L1Q8WWY6 194 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 TMEM2Q9UHN6 1383 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 IQSEC2Q5JU85 1478 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 SIPA1L3O60292 1781 aaPredicted RBP1.41□□□□□ -2.18
CHD9-215ENST00000565442 FREM1Q5H8C1 2179 aa1.41□□□□□ -2.18
CHD9-215ENST00000565442 PPIP5K1Q6PFW1 1433 aa1.4□□□□□ -2.18
CHD9-215ENST00000565442 C4AP0C0L4 1744 aa1.4□□□□□ -2.18
CHD9-215ENST00000565442 C4BP0C0L5 1744 aa1.4□□□□□ -2.18
CHD9-215ENST00000565442 NUP188Q5SRE5 1749 aa1.4□□□□□ -2.18
CHD9-215ENST00000565442 HEATR5AQ86XA9 2040 aa1.4□□□□□ -2.18
CHD9-215ENST00000565442 RP1L1Q8IWN7 2480 aaPredicted RBP1.4□□□□□ -2.19
CHD9-215ENST00000565442 LAMB4A4D0S4 1761 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 MAST2Q6P0Q8 1798 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 KDM3BQ7LBC6 1761 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 TNRC6CQ9HCJ0 1690 aaKnown RBP1.4□□□□□ -2.19
CHD9-215ENST00000565442 ADCY9O60503 1353 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 AHSA1O95433 338 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 C1QAP02745 245 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 PRM2P04554 102 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 OR5G3P0C626 314 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 SUPT4H1P63272 117 aaKnown RBP1.4□□□□□ -2.19
CHD9-215ENST00000565442 IFITM2Q01629 132 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 OR2F1Q13607 317 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 HIST3H3Q16695 136 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 Q1T7F1 81 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 OR8B3Q8NGG8 313 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 WDR61Q9GZS3 305 aaKnown RBP1.4□□□□□ -2.19
CHD9-215ENST00000565442 AFDNP55196 1824 aaKnown RBP1.4□□□□□ -2.19
CHD9-215ENST00000565442 SBF2Q86WG5 1849 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 PARP4Q9UKK3 1724 aaKnown RBP1.4□□□□□ -2.19
CHD9-215ENST00000565442 ARHGAP31Q2M1Z3 1444 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 ADGRL3Q9HAR2 1447 aa1.4□□□□□ -2.19
CHD9-215ENST00000565442 BAZ2BQ9UIF8 2168 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms