RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SMCO1Q147U7 214 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 MZT2BQ6NZ67 158 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 LYG2Q86SG7 212 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 TMEM61Q8N0U2 210 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 SCARB1Q8WTV0 552 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 PINX1Q96BK5 328 aaKnown RBP10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 CHRDL1Q9BU40 450 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 PALMDQ9NP74 551 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 TECRQ9NZ01 308 aaKnown RBP10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 TMED3Q9Y3Q3 217 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 A0A1B0GU03 582 aa10.26□□□□□ -0.77
VPS9D1-204ENST00000565023 FAM240BA0A1B0GVZ2 78 aa10.26□□□□□ -0.77
VPS9D1-204ENST00000565023 A8MWP6 167 aa10.26□□□□□ -0.77
VPS9D1-204ENST00000565023 HAGHQ16775 308 aa10.26□□□□□ -0.77
VPS9D1-204ENST00000565023 PVRIGQ6DKI7 326 aa10.26□□□□□ -0.77
VPS9D1-204ENST00000565023 SRD5A3Q9H8P0 318 aa10.26□□□□□ -0.77
VPS9D1-204ENST00000565023 RETNQ9HD89 108 aa10.26□□□□□ -0.77
VPS9D1-204ENST00000565023 UFC1Q9Y3C8 167 aa10.26□□□□□ -0.77
VPS9D1-204ENST00000565023 TRAV6A0A075B6T7 132 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 A8MZ25 164 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 OR11H12B2RN74 326 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 PITX3O75364 302 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 MT-CO2P00403 227 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 RNASE2P10153 161 aaKnown RBP10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 SLC25A6P12236 298 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 SNCAP37840 140 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 HOXA1P49639 335 aaPredicted RBP10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 TNFRSF9Q07011 255 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 BSXQ3C1V8 233 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 C4orf46Q504U0 113 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 RBPMS2Q6ZRY4 209 aaKnown RBP10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 OR52B4Q8NGK2 314 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 COQ8AQ8NI60 647 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 BSCL2Q96G97 398 aaPredicted RBP10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 ATP6V0BQ99437 205 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 TM2D3Q9BRN9 247 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 ENY2Q9NPA8 101 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 NUDT15Q9NV35 164 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
VPS9D1-204ENST00000565023 F8W735 103 aaPredicted RBP10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 I3L2K1 104 aa10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 HOXB5P09067 269 aa10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 H2AFB2P0C5Z0 115 aa10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 GGNBP1Q5YKI7 109 aa10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 MITD1Q8WV92 249 aa10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 TMEM190Q8WZ59 177 aa10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 FAM110AQ9BQ89 295 aa10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 ZNF436Q9C0F3 470 aaPredicted RBP10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 MRPL27Q9P0M9 148 aaKnown RBP10.24□□□□□ -0.77
VPS9D1-204ENST00000565023 IGHV3-49A0A0A0MS15 119 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 CEBPZOSA8MTT3 80 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 YIF1AO95070 293 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 NXPH3O95157 252 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 ADMP35318 185 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 SUB1P53999 127 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 MFAP4P55083 255 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 SPSB3Q6PJ21 355 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 SLC16A13Q7RTY0 426 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 DUSP18Q8NEJ0 188 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 OR1S1Q8NH92 325 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 MUC7Q8TAX7 377 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 MARC2Q969Z3 335 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 HEYLQ9NQ87 328 aaPredicted RBP10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 UBQLN2Q9UHD9 624 aa10.23□□□□□ -0.77
VPS9D1-204ENST00000565023 RBMY1BA6NDE4 496 aaKnown RBP10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 RBMY1EA6NEQ0 496 aaKnown RBP10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 FAM90A26D6RGX4 464 aa10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 NDUFA4O00483 81 aa10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 NUPL2O15504 423 aaKnown RBP10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 GNG7O60262 68 aa10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 ADAP1O75689 374 aa10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 RBMY1DP0C7P1 496 aaKnown RBP10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 FCGR2BP31994 310 aaPredicted RBP10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 HTR2BP41595 481 aa10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 ELLP55199 621 aaPredicted RBP10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 NRARPQ7Z6K4 114 aa10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 ENKURQ8TC29 256 aa10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 RBKSQ9H477 322 aa10.22□□□□□ -0.77
VPS9D1-204ENST00000565023 IGKV3-7A0A075B6H7 116 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 IGHV3OR16-13A0A075B7E8 117 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 IGHV3-74A0A0B4J1X5 117 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 CORTO00230 105 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 CTSGP08311 255 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 C8orf88P0DMB2 117 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 DEFA1P59665 94 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 DEFA3P59666 94 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 C2orf83Q53S99 150 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 ZFAND6Q6FIF0 208 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 SLC24A4Q8NFF2 622 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 DTD1Q8TEA8 209 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 ZNF431Q8TF32 576 aaPredicted RBP10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 HIPK2Q9H2X6 1198 aa10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 DAZ1Q9NQZ3 744 aaKnown RBP10.21□□□□□ -0.77
VPS9D1-204ENST00000565023 DNAH1Q9P2D7 4330 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 MPTX1A8MV57 137 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 C3orf84H3BNL1 204 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 IFNA21P01568 189 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 IL5P05113 134 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 RELQ04864 619 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms