RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TNCP24821 2201 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 TRBV9A0A0B4J1U6 114 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 A0A0G2JLM5 398 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 C17orf112F2Z3M2 114 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 IGHG4P01861 327 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 ELANEP08246 267 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 FGF7P21781 194 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 NPBWR1P48145 328 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 RND2P52198 227 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 FOXE3Q13461 319 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 C15orf32Q32M92 178 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 FAM209BQ5JX69 171 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 RPL7L1Q6DKI1 246 aaKnown RBP10.03□□□□□ -0.8
CLK3-214ENST00000564096 ACSM6Q6P461 480 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 EEF1AKMT3Q96AZ1 226 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 GNPNAT1Q96EK6 184 aaPredicted RBP10.03□□□□□ -0.8
CLK3-214ENST00000564096 BSCL2Q96G97 398 aaPredicted RBP10.03□□□□□ -0.8
CLK3-214ENST00000564096 ACY3Q96HD9 319 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 FANCD2OSQ96PS1 177 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 NPVFQ9HCQ7 196 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
CLK3-214ENST00000564096 I3L2K1 104 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 K7EIM0 57 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 SOX15O60248 233 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 IGLV1-40P01703 118 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 FABP1P07148 127 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 ATP5G2Q06055 141 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 Q56UQ5 140 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 TEPPQ6URK8 271 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 TMEM144Q7Z5S9 345 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 CENPVQ7Z7K6 275 aaPredicted RBP10.02□□□□□ -0.81
CLK3-214ENST00000564096 ZNF709Q8N972 641 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 MS4A10Q96PG2 267 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 ATP6V0BQ99437 205 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 WDR61Q9GZS3 305 aaKnown RBP10.02□□□□□ -0.81
CLK3-214ENST00000564096 FNDC4Q9H6D8 234 aaPredicted RBP10.02□□□□□ -0.81
CLK3-214ENST00000564096 SERTAD4Q9NUC0 356 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 WDR83OSQ9Y284 106 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 DMRT1Q9Y5R6 373 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 NSD1Q96L73 2696 aaPredicted RBP10.02□□□□□ -0.81
CLK3-214ENST00000564096 MTORP42345 2549 aa10.02□□□□□ -0.81
CLK3-214ENST00000564096 TRAV30A0A087WSZ9 112 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 TRBV7-1A0A0A6YYK4 115 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 A0A1B0GUS0 222 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 ZFP92A6NM28 416 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 MFAP4P55083 255 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 GAMTQ14353 236 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 BTNL8Q6UX41 500 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 ZNF329Q86UD4 541 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 BAP18Q8IXM2 172 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 KLHDC1Q8N7A1 406 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 HSD17B11Q8NBQ5 300 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 OR4X1Q8NH49 305 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 SCARB1Q8WTV0 552 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 ST8SIA2Q92186 375 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 TAF15Q92804 592 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLK3-214ENST00000564096 PHYHIPLQ96FC7 376 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 TXN2Q99757 166 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 WFDC1Q9HC57 220 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 CYTL1Q9NRR1 136 aa10.01□□□□□ -0.81
CLK3-214ENST00000564096 FN1P02751 2386 aaKnown RBP10□□□□□ -0.81
CLK3-214ENST00000564096 IGHV3-21A0A0B4J1V1 117 aa10□□□□□ -0.81
CLK3-214ENST00000564096 MFSD2BA6NFX1 497 aa10□□□□□ -0.81
CLK3-214ENST00000564096 GNG7O60262 68 aa10□□□□□ -0.81
CLK3-214ENST00000564096 CLN5O75503 358 aa10□□□□□ -0.81
CLK3-214ENST00000564096 NDUFB8O95169 186 aa10□□□□□ -0.81
CLK3-214ENST00000564096 PSMB8P28062 276 aa10□□□□□ -0.81
CLK3-214ENST00000564096 FCGR2BP31994 310 aaPredicted RBP10□□□□□ -0.81
CLK3-214ENST00000564096 RAB9AP51151 201 aa10□□□□□ -0.81
CLK3-214ENST00000564096 NPIPB3Q92617 1050 aa10□□□□□ -0.81
CLK3-214ENST00000564096 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
CLK3-214ENST00000564096 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
CLK3-214ENST00000564096 TIMM9Q9Y5J7 89 aa10□□□□□ -0.81
CLK3-214ENST00000564096 CLPSL1A2RUU4 121 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 OR10J1P30954 320 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 CAMLGP49069 296 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 DEFA5Q01523 94 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 RNF152Q8N8N0 203 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 THAP8Q8NA92 274 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 LINC01006Q8NI28 216 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 ZNF502Q8TBZ5 544 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 GINS3Q9BRX5 216 aa9.99□□□□□ -0.81
CLK3-214ENST00000564096 LSM4Q9Y4Z0 139 aaKnown RBP9.99□□□□□ -0.81
CLK3-214ENST00000564096 TCRBV4S1A1TA0A5B7 111 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 NUPL2O15504 423 aaKnown RBP9.98□□□□□ -0.81
CLK3-214ENST00000564096 IFNA7P01567 189 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 IGHV3-48P01763 117 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 ATP6V0CP27449 155 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 SELENOTP62341 195 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 KHDC1LQ5JSQ8 128 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 SPSB3Q6PJ21 355 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 OR5AU1Q8NGC0 362 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 TRGV9Q99603 122 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 ARV1Q9H2C2 271 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 RNF114Q9Y508 228 aa9.98□□□□□ -0.81
CLK3-214ENST00000564096 PLXNB1O43157 2135 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 AGPAT2O15120 278 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms