RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 SPTBN4Q9H254 2564 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 TTC3P53804 2025 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRAV18A0A075B6X5 111 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 C1orf105O95561 183 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 COX8AP10176 69 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 CBLN1P23435 193 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 PTGDSP41222 190 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 CX3CL1P78423 397 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 AMTNQ6UX39 209 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 AAED1Q7RTV5 226 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 TNFRSF19Q9NS68 423 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 Q9Y3F1 56 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 A8MWL6 223 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 BUB3O43684 328 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 NCR2O95944 276 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 IGF1P05019 195 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 FXYD6P3P58550 94 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 ZNF672Q499Z4 452 aaPredicted RBP4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 TEN1Q86WV5 123 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 NFAM1Q8NET5 270 aaPredicted RBP4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 NABP1Q96AH0 204 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 RPP25Q9BUL9 199 aaKnown RBP4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 BRCA2P51587 3418 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 LIFP15018 202 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 CR2P20023 1033 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 HBG1P69891 147 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 ZNF542PQ5EBM4 170 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 FAM90A2PQ658T7 463 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRAPPC6BQ86SZ2 158 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 DPH3Q96FX2 82 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 V9GY05 133 aa4.88□□□□□ -1.63
TUBGCP4-207ENST00000563963 A0A1W2PPK0 400 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 AMY1AP04745 511 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 PSMG4Q5JS54 123 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 TMEM14EPQ6UXP3 125 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 GTSCR1Q86UQ5 136 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 OR10A2Q9H208 303 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 CXCL16Q9H2A7 254 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 LSM4Q9Y4Z0 139 aaKnown RBP4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRAV8-1A0A0A6YYK1 113 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 CSRP2Q16527 193 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 WFDC3Q8IUB2 231 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 FOXB1Q99853 325 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 RPUSD1Q9UJJ7 312 aaKnown RBP4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 TSC2P49815 1807 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRAV2A0A0B4J234 112 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 C15orf61A6NNL5 157 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 H0Y8X5 98 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 H0YIZ8 118 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 CD55P08174 381 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 NMUP48645 174 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 FOXA3P55318 350 aaPredicted RBP4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 CDK5R1Q15078 307 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 TCF23Q7RTU1 214 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 GTSF1Q8WW33 167 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 MRPL24Q96A35 216 aaKnown RBP4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 EMC6Q9BV81 110 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 TM2D1Q9BX74 207 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 ZNF286AQ9HBT8 521 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 DSPPQ9NZW4 1301 aa4.87□□□□□ -1.63
TUBGCP4-207ENST00000563963 CACNA1HO95180 2353 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 A0A0G2JK05 382 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 A0A1W2PS18 150 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 SNURFLB1AK76 121 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 INSL3P51460 131 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 RPL23P62829 140 aaKnown RBP4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 RPS19BP1Q86WX3 136 aaKnown RBP4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 DLX4Q92988 240 aaPredicted RBP4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 ELSPBP1Q96BH3 223 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 DNAJA3Q96EY1 480 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 SLC25A44Q96H78 314 aaPredicted RBP4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 SCRT2Q9NQ03 307 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 PLXNA1Q9UIW2 1896 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 ARID1BQ8NFD5 2236 aaPredicted RBP4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 CDX4O14627 284 aaPredicted RBP4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 RTL8BQ17RB0 113 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 OR4C11Q6IEV9 310 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 PRSS41Q7RTY9 318 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 RTL8AQ9BWD3 113 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 Q9UF83 564 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 OR1A2Q9Y585 309 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRAV26-2A0A0B4J265 109 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 A0A0D9SEW6 157 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 FAM181BA6NEQ2 426 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 KNCNA6PVL3 124 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 IGFBP6P24592 240 aaPredicted RBP4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 LINC01559Q495D7 138 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 AMN1Q8IY45 258 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 C15orf53Q8NAA6 179 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 OR8B2Q96RD0 313 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 S1PR3Q99500 378 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 MGST2Q99735 147 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 GNB4Q9HAV0 340 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 PDFQ9HBH1 243 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 BCL2L10Q9HD36 194 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 MYLKQ15746 1914 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRAV1-1A0A0B4J248 108 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 SFTPDP35247 375 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 KLF17Q5JT82 389 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms