RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ASCL5Q7RTU5 278 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 RNASE8Q8TDE3 154 aaKnown RBP8.61□□□□□ -1.03
RNF40-204ENST00000563683 NRN1Q9NPD7 142 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 WASHC3Q9Y3C0 194 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 C17orf100A8MU93 164 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 CCL25O15444 150 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 CTRLP40313 264 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 COMPP49747 757 aaPredicted RBP8.61□□□□□ -1.03
RNF40-204ENST00000563683 ERVK11-1P61568 191 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 ZNF114Q8NC26 417 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 OCC1Q8TAD7 63 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 CHRDL1Q9BU40 450 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 TNFRSF19Q9NS68 423 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 PGPA6NDG6 321 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 HYPMO75409 117 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 MOSP00540 346 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 IGLV2-14P01704 120 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 LINC00310P59036 64 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 C19orf35Q6ZS72 473 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 OR4C5Q8NGB2 326 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 OR10W1Q8NGF6 305 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 FAM57AQ8TBR7 257 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 KCNS1Q96KK3 526 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
RNF40-204ENST00000563683 RAB1BQ9H0U4 201 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 ZNRD1Q9P1U0 126 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
RNF40-204ENST00000563683 LY96Q9Y6Y9 160 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 LYNX1G3V0Z9 82 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 DLL1O00548 723 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 LYNX1P0DP58 116 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 ARF6P62330 175 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
RNF40-204ENST00000563683 CENPWQ5EE01 88 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 PLA2G2CQ5R387 149 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 OR2T6Q8NHC8 308 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 FAM222BQ8WU58 562 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 RASL11BQ9BPW5 248 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 CDC42EP3Q9UKI2 254 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 TLN1Q9Y490 2541 aaKnown RBP8.6□□□□□ -1.03
RNF40-204ENST00000563683 PMS2P5A8MQ11 134 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 CSN3P07498 182 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 SAA1P0DJI8 122 aaPredicted RBP8.6□□□□□ -1.03
RNF40-204ENST00000563683 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 MBNL2Q5VZF2 373 aaKnown RBP8.6□□□□□ -1.03
RNF40-204ENST00000563683 SMIM15Q7Z3B0 74 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 MMD2Q8IY49 270 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 OR8B3Q8NGG8 313 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 OR8B2Q96RD0 313 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 COX11Q9Y6N1 276 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 ANKHD1Q8IWZ3 2542 aaKnown RBP8.6□□□□□ -1.03
RNF40-204ENST00000563683 CEP295Q9C0D2 2601 aa8.6□□□□□ -1.03
RNF40-204ENST00000563683 DPRXA6NFQ7 191 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 C15orf61A6NNL5 157 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 NDUFB8O95169 186 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 TOMM40O96008 361 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 WT1P19544 449 aaPredicted RBP8.59□□□□□ -1.03
RNF40-204ENST00000563683 MC5RP33032 325 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 OR4F17Q8NGA8 305 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 PERPQ96FX8 193 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 ARFGEF3Q5TH69 2177 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 IGHV1-69-2A0A0G2JMI3 117 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 COL8A1P27658 744 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 ZNF137PP52743 207 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 OR9G1Q8NH87 305 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 SNRNP40Q96DI7 357 aaKnown RBP8.59□□□□□ -1.03
RNF40-204ENST00000563683 GSX1Q9H4S2 264 aaPredicted RBP8.59□□□□□ -1.03
RNF40-204ENST00000563683 AMMECR1Q9Y4X0 333 aaPredicted RBP8.59□□□□□ -1.03
RNF40-204ENST00000563683 ARL2-SNX15V9GYD0 113 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 C15orf62A8K5M9 175 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 GNG7O60262 68 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 C10orf55Q5SWW7 151 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 GGTLC1Q9BX51 225 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 ZNF430Q9H8G1 570 aaPredicted RBP8.59□□□□□ -1.03
RNF40-204ENST00000563683 SEPSECSQ9HD40 501 aaKnown RBP8.59□□□□□ -1.03
RNF40-204ENST00000563683 DOPEY2Q9Y3R5 2298 aa8.59□□□□□ -1.03
RNF40-204ENST00000563683 EFNB3Q15768 340 aa8.59□□□□□ -1.04
RNF40-204ENST00000563683 SPATA31B1PQ5VZV4 182 aa8.59□□□□□ -1.04
RNF40-204ENST00000563683 PNKDQ8N490 385 aa8.59□□□□□ -1.04
RNF40-204ENST00000563683 AP1S3Q96PC3 154 aa8.59□□□□□ -1.04
RNF40-204ENST00000563683 SCNM1Q9BWG6 230 aa8.59□□□□□ -1.04
RNF40-204ENST00000563683 IFI27L2Q9H2X8 130 aa8.59□□□□□ -1.04
RNF40-204ENST00000563683 HIF1ANQ9NWT6 349 aa8.59□□□□□ -1.04
RNF40-204ENST00000563683 CACNA1AO00555 2505 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 C9JCJ5 164 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 MLANAQ16655 118 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 DUX4L9Q6RFH8 374 aaPredicted RBP8.58□□□□□ -1.04
RNF40-204ENST00000563683 GFRA3O60609 400 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 P01737 135 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 HINT1P49773 126 aaPredicted RBP8.58□□□□□ -1.04
RNF40-204ENST00000563683 OSR1Q8TAX0 266 aaPredicted RBP8.58□□□□□ -1.04
RNF40-204ENST00000563683 TMEM186Q96B77 213 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 TRBV20OR9-2A0A075B6H5 130 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 PPIAL4CA0A0B4J2A2 164 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 ZNF324O75467 553 aaPredicted RBP8.58□□□□□ -1.04
RNF40-204ENST00000563683 STAG3L2P0CL84 134 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 PPIAL4GP0DN37 164 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 CEACAM3P40198 252 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 RNF151Q2KHN1 245 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms