RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SCGB1C1Q8TD33 95 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 ZNF418Q8TF45 676 aaPredicted RBP7.95□□□□□ -1.14
SMG1-208ENST00000563448 PHYHIPLQ96FC7 376 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 SLC35E1Q96K37 410 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 RSG1Q9BU20 258 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 ZNF580Q9UK33 172 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 LSM4Q9Y4Z0 139 aaKnown RBP7.95□□□□□ -1.14
SMG1-208ENST00000563448 IGKV1OR2-108A0A075B7D4 117 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 TRBV9A0A0B4J1U6 114 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 FAM181BA6NEQ2 426 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 OR2J3O76001 311 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 NDUFB8O95169 186 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 CFHR3Q02985 330 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 AKR1C1Q04828 323 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 ETFRF1Q6IPR1 90 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 BTNL8Q6UX41 500 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 TMEM144Q7Z5S9 345 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 Q8N2B8 174 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 TMED6Q8WW62 240 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 SLC25A32Q9H2D1 315 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 F8P00451 2351 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 CRLF1O75462 422 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 IFNA7P01567 189 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 RNASE1P07998 156 aaKnown RBP7.94□□□□□ -1.14
SMG1-208ENST00000563448 SEC11BP0C7V7 166 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 FAM157CP0CG43 387 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 HIST1H1BP16401 226 aaKnown RBP7.94□□□□□ -1.14
SMG1-208ENST00000563448 FAM74A1Q5RGS3 127 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 TEPPQ6URK8 271 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 SCARB1Q8WTV0 552 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 NPIPB3Q92617 1050 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 ACY3Q96HD9 319 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 MS4A10Q96PG2 267 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 MGST2Q99735 147 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 NPCDR1Q9BY65 106 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 ZNF355PQ9NSJ1 428 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 FN1P02751 2386 aaKnown RBP7.94□□□□□ -1.14
SMG1-208ENST00000563448 MTORP42345 2549 aa7.94□□□□□ -1.14
SMG1-208ENST00000563448 CYB5BO43169 146 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 RND2P52198 227 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 Q6ZSV7 163 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 CENPVQ7Z7K6 275 aaPredicted RBP7.93□□□□□ -1.14
SMG1-208ENST00000563448 THAP8Q8NA92 274 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 GNPNAT1Q96EK6 184 aaPredicted RBP7.93□□□□□ -1.14
SMG1-208ENST00000563448 THYN1Q9P016 225 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 UBQLN2Q9UHD9 624 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 FBXL7Q9UJT9 491 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 TIMM9Q9Y5J7 89 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 S4R3C0 116 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 IGKV1D-37A0A075B6S9 117 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 MFSD2BA6NFX1 497 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 MPDU1O75352 247 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 BRI3O95415 125 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 IGLV1-40P01703 118 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 RHOGP84095 191 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 ACSM6Q6P461 480 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 C10orf99Q6UWK7 81 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 TMEM116Q8NCL8 245 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 OR2G3Q8NGZ4 309 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 PSMG3Q9BT73 122 aaPredicted RBP7.93□□□□□ -1.14
SMG1-208ENST00000563448 PRELID1Q9Y255 219 aa7.93□□□□□ -1.14
SMG1-208ENST00000563448 NSD1Q96L73 2696 aaPredicted RBP7.93□□□□□ -1.14
SMG1-208ENST00000563448 F8W735 103 aaPredicted RBP7.92□□□□□ -1.14
SMG1-208ENST00000563448 H3BUA1 57 aa7.92□□□□□ -1.14
SMG1-208ENST00000563448 AGPAT2O15120 278 aa7.92□□□□□ -1.14
SMG1-208ENST00000563448 TSPAN9O75954 239 aa7.92□□□□□ -1.14
SMG1-208ENST00000563448 CAMLGP49069 296 aa7.92□□□□□ -1.14
SMG1-208ENST00000563448 EIF5AL1Q6IS14 154 aaKnown RBP7.92□□□□□ -1.14
SMG1-208ENST00000563448 TMEM182Q6ZP80 229 aaPredicted RBP7.92□□□□□ -1.14
SMG1-208ENST00000563448 OR4X1Q8NH49 305 aa7.92□□□□□ -1.14
SMG1-208ENST00000563448 GGTLC1Q9BX51 225 aa7.92□□□□□ -1.14
SMG1-208ENST00000563448 SERTAD4Q9NUC0 356 aa7.92□□□□□ -1.14
SMG1-208ENST00000563448 LOC105371267A0A1B0GV96 52 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 C17orf112F2Z3M2 114 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 IGHV3-23P01764 117 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 OR10J1P30954 320 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 RPL15P61313 204 aaKnown RBP7.91□□□□□ -1.14
SMG1-208ENST00000563448 C15orf32Q32M92 178 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 ZNF329Q86UD4 541 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 NECAP1Q8NC96 275 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 PCNPQ8WW12 178 aaKnown RBP7.91□□□□□ -1.14
SMG1-208ENST00000563448 JMJD8Q96S16 334 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 VSIRQ9H7M9 311 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 TMA7Q9Y2S6 64 aaKnown RBP7.91□□□□□ -1.14
SMG1-208ENST00000563448 CLN5O75503 358 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 IGHG4P01861 327 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 TRGV3P03979 118 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 PF4V1P10720 104 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 SULT1A2P50226 295 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 MFAP4P55083 255 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 MIC13Q5XKP0 118 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 VN1R17PQ8TDU5 208 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 KLK15Q9H2R5 256 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 C21orf62Q9NYP8 219 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 SLC45A2Q9UMX9 530 aa7.91□□□□□ -1.14
SMG1-208ENST00000563448 TCRBV4S1A1TA0A5B7 111 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 FAM223BA6NKX1 122 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 ZFP92A6NM28 416 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 TCF21O43680 179 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms