RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 CEACAM5P06731 702 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 ZDHHC16Q969W1 377 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 FGF22Q9HCT0 170 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 KNL1Q8NG31 2342 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 SEC16AO15027 2179 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 PLXNA2O75051 1894 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 H7C1H1 209 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 ATOX1O00244 68 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 SCRG1O75711 98 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 NEGR1Q7Z3B1 354 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 ZAR1Q86SH2 424 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 GCSAMQ8N6F7 178 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 POLR2AP24928 1970 aaKnown RBP5.24□□□□□ -1.57
CLK3-212ENST00000563418 RRN3P1Q2M238 152 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 IGFLR1Q9H665 355 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 NDUFA3O95167 84 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 VDAC2P45880 294 aaPredicted RBP5.24□□□□□ -1.57
CLK3-212ENST00000563418 INO80CQ6PI98 192 aaPredicted RBP5.24□□□□□ -1.57
CLK3-212ENST00000563418 YPEL4Q96NS1 127 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 HLA-DMBP28068 263 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 CCL14Q16627 93 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 PCSK4Q6UW60 755 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 ZNF106Q9H2Y7 1883 aaKnown RBP5.24□□□□□ -1.57
CLK3-212ENST00000563418 MDC1Q14676 2089 aaKnown RBP5.24□□□□□ -1.57
CLK3-212ENST00000563418 A0A1B0GUS0 222 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 IGKV1D-16P01601 117 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 SLC37A2Q8TED4 501 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 ATG2BQ96BY7 2078 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 F2Z2F3 143 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 LINC00271P0C7V0 271 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 RPL32P62910 135 aaKnown RBP5.24□□□□□ -1.57
CLK3-212ENST00000563418 C5orf24Q7Z6I8 188 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 V9GYV3 84 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 V9GYY9 64 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 ZNF831Q5JPB2 1677 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 PRR33A8MZF0 331 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 J3QW42 95 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 DGAT2L7PQ6IED9 249 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 Q6ZUT4 128 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 LAMTOR3Q9UHA4 124 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 TGFAP01135 160 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 MRPL43Q8N983 215 aaKnown RBP5.24□□□□□ -1.57
CLK3-212ENST00000563418 MMP17Q9ULZ9 603 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 M0R2P5 195 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 FAM53AQ6NSI3 398 aaPredicted RBP5.24□□□□□ -1.57
CLK3-212ENST00000563418 GOLT1AQ6ZVE7 132 aa5.24□□□□□ -1.57
CLK3-212ENST00000563418 PTGDSP41222 190 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 C1QTNF5Q9BXJ0 243 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 DECR2Q9NUI1 292 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 UBR3Q6ZT12 1888 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 ASCC3Q8N3C0 2202 aaKnown RBP5.23□□□□□ -1.57
CLK3-212ENST00000563418 ETV2O00321 342 aaPredicted RBP5.23□□□□□ -1.57
CLK3-212ENST00000563418 MYF5P13349 255 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 LINC00305Q7Z4B0 112 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 PPP1R32Q7Z5V6 425 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 C9JAW5 83 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 PRKNO60260 465 aaPredicted RBP5.23□□□□□ -1.57
CLK3-212ENST00000563418 C1orf61Q13536 156 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 TMEM170BQ5T4T1 132 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 ZIC4Q8N9L1 334 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 C11orf52Q96A22 123 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 TNFRSF18Q9Y5U5 241 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 MRPL23Q16540 153 aaKnown RBP5.23□□□□□ -1.57
CLK3-212ENST00000563418 TM4SF19Q96DZ7 209 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 NPIPB11E5RHQ5 1161 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 SYNGR3O43761 229 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 TMEM78Q5T7P6 136 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 RASL10BQ96S79 203 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 FSCN3Q9NQT6 498 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 URB1O60287 2271 aaKnown RBP5.23□□□□□ -1.57
CLK3-212ENST00000563418 PEBP1P30086 187 aaKnown RBP5.23□□□□□ -1.57
CLK3-212ENST00000563418 MIR17HGQ75NE6 70 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 RNF182Q8N6D2 247 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 ZNF492Q9P255 531 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 COL5A3P25940 1745 aaPredicted RBP5.23□□□□□ -1.57
CLK3-212ENST00000563418 HAPLN4Q86UW8 402 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 CFHR5Q9BXR6 569 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 MRPL20Q9BYC9 149 aaKnown RBP5.23□□□□□ -1.57
CLK3-212ENST00000563418 LIME1Q9H400 295 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 A0A0A6YYD4 124 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 NPIPB6E9PJ23 425 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 CTSBP07858 339 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 VKORC1Q9BQB6 163 aa5.23□□□□□ -1.57
CLK3-212ENST00000563418 SLC25A20O43772 301 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 MGPP08493 103 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 TREML4Q6UXN2 200 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 TDHQ8IZJ6 230 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 PSG8Q9UQ74 426 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 C15orf53Q8NAA6 179 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 RNF183Q96D59 192 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 CRYGCP07315 174 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 SMRP1Q8NCR6 262 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 KLF13Q9Y2Y9 288 aaPredicted RBP5.22□□□□□ -1.57
CLK3-212ENST00000563418 CACNA1DQ01668 2161 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 THSD7AQ9UPZ6 1657 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 TRGV8A0A0C4DH27 118 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 LYPD3O95274 346 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 PRADC1Q9BSG0 188 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 RFNGQ9Y644 331 aa5.22□□□□□ -1.57
CLK3-212ENST00000563418 NPYP01303 97 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms