RNA–Protein interactions for RNA: ENST00000562776.5

SIN3A-204, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-204ENST00000562776 TRAV25A0A0B4J276 109 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 DUXBA0A1W2PPF3 345 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 NAP1L6A6NFF2 107 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 CEBPZOSA8MTT3 80 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 SCAF4O95104 1147 aaKnown RBP8.22□□□□□ -1.09
SIN3A-204ENST00000562776 VAMP1P23763 118 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 OPRK1P41145 380 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 SMCO1Q147U7 214 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 RBMS2Q15434 407 aaKnown RBP8.22□□□□□ -1.09
SIN3A-204ENST00000562776 SLC16A13Q7RTY0 426 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 CENPSQ8N2Z9 138 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 OR10C1Q96KK4 312 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 SDHCQ99643 169 aaPredicted RBP8.22□□□□□ -1.09
SIN3A-204ENST00000562776 FNDC4Q9H6D8 234 aaPredicted RBP8.22□□□□□ -1.09
SIN3A-204ENST00000562776 TUBA4BQ9H853 241 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 ZMAT4Q9H898 229 aa8.22□□□□□ -1.09
SIN3A-204ENST00000562776 HEYLQ9NQ87 328 aaPredicted RBP8.22□□□□□ -1.09
SIN3A-204ENST00000562776 A0A1B0GU03 582 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 ZNF207O43670 478 aaKnown RBP8.21□□□□□ -1.1
SIN3A-204ENST00000562776 YIF1AO95070 293 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 NDUFB6O95139 128 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 NXPH3O95157 252 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 TNFRSF9Q07011 255 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 PPP1R1AQ13522 171 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 ANKRD55Q3KP44 614 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 C2orf83Q53S99 150 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 RBPMS2Q6ZRY4 209 aaKnown RBP8.21□□□□□ -1.1
SIN3A-204ENST00000562776 LRTM2Q8N967 370 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 HSPB7Q9UBY9 170 aa8.21□□□□□ -1.1
SIN3A-204ENST00000562776 RPS10-NUDT3A0A1W2PQS6 291 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 OR11H12B2RN74 326 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 TSPAN4O14817 238 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 CLN5O75503 358 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 SFT2D2O95562 160 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 TMEM50AO95807 157 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 IL7P13232 177 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 UBE2MP61081 183 aaKnown RBP8.2□□□□□ -1.1
SIN3A-204ENST00000562776 ZNF600Q6ZNG1 722 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 DEFB125Q8N687 156 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 OR52B4Q8NGK2 314 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 OR4X1Q8NH49 305 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 RNASEH2CQ8TDP1 164 aaKnown RBP8.2□□□□□ -1.1
SIN3A-204ENST00000562776 DTD1Q8TEA8 209 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 SPAG8Q99932 426 aaPredicted RBP8.2□□□□□ -1.1
SIN3A-204ENST00000562776 WFDC10AQ9H1F0 79 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 HIPK2Q9H2X6 1198 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 MRPL36Q9P0J6 103 aaKnown RBP8.2□□□□□ -1.1
SIN3A-204ENST00000562776 SMPXQ9UHP9 88 aa8.2□□□□□ -1.1
SIN3A-204ENST00000562776 IGHV7-4-1A0A0J9YVY3 117 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 CENPXA8MT69 81 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 SCGB2A1O75556 95 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 SLC25A6P12236 298 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 LYL1P12980 280 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 NPY1RP25929 384 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 BTCP35070 178 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 MLANAQ16655 118 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 HAGHQ16775 308 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 LAMTOR1Q6IAA8 161 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 TOMM20LQ6UXN7 152 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 LINC00322Q6ZN03 302 aaPredicted RBP8.19□□□□□ -1.1
SIN3A-204ENST00000562776 NOXA1Q86UR1 476 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 TMEM116Q8NCL8 245 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 OR1S1Q8NH92 325 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 TMEM170AQ8WVE7 144 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 C7orf50Q9BRJ6 194 aaKnown RBP8.19□□□□□ -1.1
SIN3A-204ENST00000562776 GINS3Q9BRX5 216 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 RBKSQ9H477 322 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 SRD5A3Q9H8P0 318 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 EDA2RQ9HAV5 297 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 TMED3Q9Y3Q3 217 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 PUS1Q9Y606 427 aaKnown RBP eCLIP8.19□□□□□ -1.1
SIN3A-204ENST00000562776 U3KQ87 197 aa8.19□□□□□ -1.1
SIN3A-204ENST00000562776 TRAV14DV4A0A0A6YYC5 116 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 LINC00854A0A1B0GVQ3 168 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 CHEK1O14757 476 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 PITX3O75364 302 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 IFNA10P01566 189 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 SLC25A4P12235 298 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 PRSS54Q6PEW0 395 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 RNF2Q99496 336 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 SPATA25Q9BR10 227 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 RHPN1-AS1Q9BWJ2 59 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 FLVCR2Q9UPI3 526 aa8.18□□□□□ -1.1
SIN3A-204ENST00000562776 BIRC6Q9NR09 4857 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 TRAV30A0A087WSZ9 112 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 IGHV3-49A0A0A0MS15 119 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 LCE6AA0A183 80 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 C9orf170A2RU37 121 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
SIN3A-204ENST00000562776 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
SIN3A-204ENST00000562776 IGKV1-17P01599 117 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
SIN3A-204ENST00000562776 BMI1P35226 326 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 RND2P52198 227 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 ETFRF1Q6IPR1 90 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 LINC00299Q6ZSB3 139 aa8.17□□□□□ -1.1
SIN3A-204ENST00000562776 TENM2Q9NT68 2774 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms