RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 C11orf68Q9H3H3 251 aaKnown RBP0.52□□□□□ -2.33
DENND4A-205ENST00000562540 TP73-AS1Q9UF72 201 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 PLXND1Q9Y4D7 1925 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 TRAV1-1A0A0B4J248 108 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 DPRXA6NFQ7 191 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 FAAHO00519 579 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 HIST1H1EP10412 219 aaKnown RBP0.51□□□□□ -2.33
DENND4A-205ENST00000562540 COX6A1P12074 109 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 HIST1H1TP22492 207 aaPredicted RBP0.51□□□□□ -2.33
DENND4A-205ENST00000562540 SNRPD2P62316 118 aaKnown RBP0.51□□□□□ -2.33
DENND4A-205ENST00000562540 CNBPP62633 177 aaKnown RBP0.51□□□□□ -2.33
DENND4A-205ENST00000562540 RNASE10Q5GAN6 216 aaKnown RBP0.51□□□□□ -2.33
DENND4A-205ENST00000562540 CDKL4Q5MAI5 379 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 CNTRLQ7Z7A1 2325 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 HIST3H2BBQ8N257 126 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 TMEM86BQ8N661 226 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 UNC13CQ8NB66 2214 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 ZNF418Q8TF45 676 aaPredicted RBP0.51□□□□□ -2.33
DENND4A-205ENST00000562540 SFT2D1Q8WV19 159 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 TAS2R4Q9NYW5 299 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 CASP8AP2Q9UKL3 1982 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 GUCA1BQ9UMX6 200 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 PKIGQ9Y2B9 76 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 SCN10AQ9Y5Y9 1956 aa0.51□□□□□ -2.33
DENND4A-205ENST00000562540 SCN8AQ9UQD0 1980 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 ZNF106Q9H2Y7 1883 aaKnown RBP0.5□□□□□ -2.33
DENND4A-205ENST00000562540 LAMA4Q16363 1823 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 TRBV6-8A0A0A6YYG3 113 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 EXOC1LA0A1B0GW35 172 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 C19orf84I3L1E1 186 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 M0R2N4 97 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 SULT1B1O43704 296 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 OR2B3O76000 313 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 IFNA5P01569 189 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 MGST1P10620 155 aaKnown RBP0.5□□□□□ -2.33
DENND4A-205ENST00000562540 SSR2P43308 183 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 RHOGP84095 191 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 OR2F1Q13607 317 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 GDF5OSQ5U4N7 250 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 SPOPLQ6IQ16 392 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 ERGIC3Q9Y282 383 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 TMEM56-RWDD3S4R434 201 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 KIAA1549Q9HCM3 1950 aa0.5□□□□□ -2.33
DENND4A-205ENST00000562540 MACF1Q9UPN3 7388 aaKnown RBP0.5□□□□□ -2.33
DENND4A-205ENST00000562540 RIC1Q4ADV7 1423 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.49□□□□□ -2.33
DENND4A-205ENST00000562540 OR4C46A6NHA9 309 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 M0R036 132 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 PROSCO94903 275 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 CRYZL1O95825 349 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 RPL5P46777 297 aaKnown RBP0.49□□□□□ -2.33
DENND4A-205ENST00000562540 SULT1A1P50225 295 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 NKX2-5P52952 324 aaPredicted RBP0.49□□□□□ -2.33
DENND4A-205ENST00000562540 RPS20P60866 119 aaKnown RBP0.49□□□□□ -2.33
DENND4A-205ENST00000562540 ACOT6Q3I5F7 207 aaPredicted RBP0.49□□□□□ -2.33
DENND4A-205ENST00000562540 TRAPPC6BQ86SZ2 158 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 SIGLECL1Q8N7X8 197 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 DCUN1D1Q96GG9 259 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 OSTCQ9NRP0 149 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 VPS29Q9UBQ0 182 aa0.49□□□□□ -2.33
DENND4A-205ENST00000562540 TOPBP1Q92547 1522 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 BUB1B-PAK6H3BSN5 160 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 AHSA1O95433 338 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 S100A4P26447 101 aaKnown RBP0.48□□□□□ -2.33
DENND4A-205ENST00000562540 DEFA1P59665 94 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 TEX261Q6UWH6 196 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 OR13D1Q8NGV5 346 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 C4orf3Q8WVX3 66 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 NHP2Q9NX24 153 aaKnown RBP0.48□□□□□ -2.33
DENND4A-205ENST00000562540 RASL12Q9NYN1 266 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 MRPL27Q9P0M9 148 aaKnown RBP0.48□□□□□ -2.33
DENND4A-205ENST00000562540 SLC35A3Q9Y2D2 325 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 U3KQ87 197 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 COL4A5P29400 1685 aa0.48□□□□□ -2.33
DENND4A-205ENST00000562540 MAP3K5Q99683 1374 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 CACNA1EQ15878 2313 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 TRAV12-1A0A0B4J245 112 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 PIRO00625 290 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 INE1O15225 51 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 LYZL6O75951 148 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 CDC42P60953 191 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 OR52R1Q8NGF1 315 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 GPR146Q96CH1 333 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 C20orf27Q9GZN8 174 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 CCDC90BQ9GZT6 254 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 DCSTAMPQ9H295 470 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 FREM3P0C091 2139 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 SPTBP11277 2137 aa0.47□□□□□ -2.33
DENND4A-205ENST00000562540 ZNF462Q96JM2 2506 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 NUP155O75694 1391 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 ECM29Q5VYK3 1845 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 TRAV3A0A0B4J244 114 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 SMIM23A6NLE4 172 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 TTRP02766 147 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 IFNA16P05015 189 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 RBP1P09455 135 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 SMIM10L2AP0DMW4 78 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 SMIM10L2BP0DMW5 78 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 ZNF25P17030 456 aaPredicted RBP0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms