RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 ERVFRD-1P60508 538 aa9.41□□□□□ -0.9
PCAT1-202ENST00000561978 C2orf83Q53S99 150 aa9.41□□□□□ -0.9
PCAT1-202ENST00000561978 C1QL4Q86Z23 238 aa9.41□□□□□ -0.9
PCAT1-202ENST00000561978 OR1L8Q8NGR8 309 aa9.41□□□□□ -0.9
PCAT1-202ENST00000561978 ZNF48Q96MX3 618 aaPredicted RBP9.41□□□□□ -0.9
PCAT1-202ENST00000561978 MGST2Q99735 147 aa9.41□□□□□ -0.9
PCAT1-202ENST00000561978 GGTLC1Q9BX51 225 aa9.41□□□□□ -0.9
PCAT1-202ENST00000561978 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
PCAT1-202ENST00000561978 BEX4Q9NWD9 120 aaPredicted RBP9.41□□□□□ -0.9
PCAT1-202ENST00000561978 PXMP4Q9Y6I8 212 aa9.41□□□□□ -0.9
PCAT1-202ENST00000561978 TET2Q6N021 2002 aaPredicted RBP9.41□□□□□ -0.9
PCAT1-202ENST00000561978 INS-IGF2F8WCM5 200 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 HMGB3O15347 200 aaKnown RBP9.4□□□□□ -0.9
PCAT1-202ENST00000561978 IGHV4-39P01824 125 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 IGHV1-8P0DP01 117 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 RPL29P47914 159 aaKnown RBP9.4□□□□□ -0.9
PCAT1-202ENST00000561978 ERHP84090 104 aaKnown RBP9.4□□□□□ -0.9
PCAT1-202ENST00000561978 TMEM241Q24JQ0 296 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 WDR25Q64LD2 544 aaPredicted RBP9.4□□□□□ -0.9
PCAT1-202ENST00000561978 ST6GALNAC6Q969X2 333 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 YPEL4Q96NS1 127 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 NABP2Q9BQ15 211 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 SMIM7Q9BQ49 75 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 TMPRSS5Q9H3S3 457 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 WASHC3Q9Y3C0 194 aa9.4□□□□□ -0.9
PCAT1-202ENST00000561978 CLDN34H7C241 214 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 PDE6DO43924 150 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 CXorf1O96002 111 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
PCAT1-202ENST00000561978 ARSJQ5FYB0 599 aaPredicted RBP9.39□□□□□ -0.91
PCAT1-202ENST00000561978 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 WFDC11Q8NEX6 87 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 OR4F5Q8NH21 305 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 TMEM167AQ8TBQ9 72 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 DPF1Q92782 380 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 OR4F4Q96R69 305 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 FOXC2Q99958 501 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 TMEM133Q9H2Q1 129 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 ZNRD1Q9P1U0 126 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 hCG_1809904A0A1W2PP81 198 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 A0A1W2PR64 198 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 A0A1W2PRV1 198 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 PAGE4O60829 102 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 YIF1AO95070 293 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 RBP4P02753 201 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 LGALS7P47929 136 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 RHOBP62745 196 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 Q5PR19 223 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 TMEM144Q7Z5S9 345 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 RAB1BQ9H0U4 201 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 NDUFA4L2Q9NRX3 87 aa9.39□□□□□ -0.91
PCAT1-202ENST00000561978 C11orf94C9JXX5 98 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 DLEU1O43261 78 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 MT-CO2P00403 227 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 SUB1P53999 127 aaKnown RBP eCLIP9.38□□□□□ -0.91
PCAT1-202ENST00000561978 ELOBQ15370 118 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 BSXQ3C1V8 233 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 VMA21Q3ZAQ7 101 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 MIC13Q5XKP0 118 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 SPNS3Q6ZMD2 512 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 ZFP82Q8N141 532 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 C2CD4CQ8TF44 421 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 CACNG8Q8WXS5 425 aa9.38□□□□□ -0.91
PCAT1-202ENST00000561978 PATZ1Q9HBE1 687 aaKnown RBP9.38□□□□□ -0.91
PCAT1-202ENST00000561978 F6UZH7 168 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 TGOLN2O43493 480 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 PAX1P15863 534 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 COL8A2P25067 703 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 REG1BP48304 166 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 DNLZQ5SXM8 178 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 MRPL41Q8IXM3 137 aaKnown RBP9.37□□□□□ -0.91
PCAT1-202ENST00000561978 LRRC75A-AS1Q8N1F1 130 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 C19orf24Q9BVV8 132 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 LYNX1G3V0Z9 82 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 VENTXO95231 258 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 LYNX1P0DP58 116 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 MYOD1P15172 320 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 RND2P52198 227 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 GCSAMLQ5JQS6 135 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 C11orf42Q8N5U0 333 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 STPG3Q8N7X2 389 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 RPUSD4Q96CM3 377 aaKnown RBP9.37□□□□□ -0.91
PCAT1-202ENST00000561978 C1orf159Q96HA4 380 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 SLC35E1Q96K37 410 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 PARLQ9H300 379 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 ABCA1O95477 2261 aa9.37□□□□□ -0.91
PCAT1-202ENST00000561978 RNASE2P10153 161 aaKnown RBP9.36□□□□□ -0.91
PCAT1-202ENST00000561978 RPS10P46783 165 aaKnown RBP9.36□□□□□ -0.91
PCAT1-202ENST00000561978 EFNA4P52798 201 aa9.36□□□□□ -0.91
PCAT1-202ENST00000561978 HLA-DRB5Q30154 266 aa9.36□□□□□ -0.91
PCAT1-202ENST00000561978 ZNF841Q6ZN19 808 aa9.36□□□□□ -0.91
PCAT1-202ENST00000561978 OR8B3Q8NGG8 313 aa9.36□□□□□ -0.91
PCAT1-202ENST00000561978 SSMEM1Q8WWF3 244 aa9.36□□□□□ -0.91
PCAT1-202ENST00000561978 TIMD4Q96H15 378 aa9.36□□□□□ -0.91
PCAT1-202ENST00000561978 PACRGQ96M98 296 aaPredicted RBP9.36□□□□□ -0.91
PCAT1-202ENST00000561978 Q96MF0 132 aa9.36□□□□□ -0.91
PCAT1-202ENST00000561978 OR8B2Q96RD0 313 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms