RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TRAV30A0A087WSZ9 112 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 ZFP92A6NM28 416 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 G3V318 75 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 TEX46H3BTG2 121 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 I3L2K1 104 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 AGPAT2O15120 278 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 FAM157CP0CG43 387 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 NPBWR1P48145 328 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 MFAP4P55083 255 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 SELENOTP62341 195 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 KLK9Q2XQG4 91 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 ACOT6Q3I5F7 207 aaPredicted RBP8.1□□□□□ -1.11
USP3-219ENST00000561326 FAM74A1Q5RGS3 127 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 ACSM6Q6P461 480 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 TMEM182Q6ZP80 229 aaPredicted RBP8.1□□□□□ -1.11
USP3-219ENST00000561326 NECAP1Q8NC96 275 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 TMEM116Q8NCL8 245 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 OR4X1Q8NH49 305 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 OR2T6Q8NHC8 308 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 VN1R17PQ8TDU5 208 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 CXorf58Q96LI9 332 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 JMJD8Q96S16 334 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 SMR3AQ99954 134 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 FNDC4Q9H6D8 234 aaPredicted RBP8.1□□□□□ -1.11
USP3-219ENST00000561326 GAR1Q9NY12 217 aaKnown RBP8.1□□□□□ -1.11
USP3-219ENST00000561326 ZNF580Q9UK33 172 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 KLK9Q9UKQ9 250 aa8.1□□□□□ -1.11
USP3-219ENST00000561326 LSM4Q9Y4Z0 139 aaKnown RBP8.1□□□□□ -1.11
USP3-219ENST00000561326 H3BUA1 57 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 BRI3O95415 125 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 TSPAN15O95858 294 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 CRYBA1P05813 215 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 RPL29P47914 159 aaKnown RBP8.09□□□□□ -1.11
USP3-219ENST00000561326 RND2P52198 227 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 RAB2AP61019 212 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 TMEM41BQ5BJD5 291 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 FFAR4Q5NUL3 377 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 Q6ZRG5 221 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 THAP8Q8NA92 274 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 TXN2Q99757 166 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 GGTLC1Q9BX51 225 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 FBXL7Q9UJT9 491 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 DMRT1Q9Y5R6 373 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 MAST4O15021 2626 aa8.09□□□□□ -1.11
USP3-219ENST00000561326 FAM223BA6NKX1 122 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 CLDN34H7C241 214 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 K7EIM0 57 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 OR2J3O76001 311 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 IGHV3-48P01763 117 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 M6PRP20645 277 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 OR10J1P30954 320 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 RPL15P61313 204 aaKnown RBP8.08□□□□□ -1.12
USP3-219ENST00000561326 SLC35B1P78383 322 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 C19orf35Q6ZS72 473 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 CYP2G1PQ6ZSU1 146 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 FAM223AQ8IWN6 122 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 FAM213BQ8TBF2 198 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 TRGV9Q99603 122 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 MGST2Q99735 147 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 C19orf24Q9BVV8 132 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 ACTR3CQ9C0K3 210 aaPredicted RBP8.08□□□□□ -1.12
USP3-219ENST00000561326 SLC39A9Q9NUM3 307 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 PFDN2Q9UHV9 154 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 SLC45A2Q9UMX9 530 aa8.08□□□□□ -1.12
USP3-219ENST00000561326 TRBV7-1A0A0A6YYK4 115 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 TRBV9A0A0B4J1U6 114 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 IGHV3-21A0A0B4J1V1 117 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 A0A0G2JLM5 398 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 A0A1W2PPV4 95 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 TCRBV4S1A1TA0A5B7 111 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 TMEM89A2RUT3 159 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 DNAJC9-AS1A6NH13 148 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 NUDT19A8MXV4 375 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 GNG7O60262 68 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 CLN5O75503 358 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 NDUFB8O95169 186 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 HBE1P02100 147 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 TRGV3P03979 118 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 NMBP08949 121 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 H2AFB1P0C5Y9 115 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 ELLP55199 621 aaPredicted RBP8.07□□□□□ -1.12
USP3-219ENST00000561326 B2MP61769 119 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 RHOGP84095 191 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 ATP5G2Q06055 141 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 ZNF616Q08AN1 781 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 Q56UQ5 140 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 C19orf54Q5BKX5 351 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 MIC13Q5XKP0 118 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 OR10G4Q8NGN3 311 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 OR10G9Q8NGN4 311 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 OR10G7Q8NGN6 311 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 EEF1AKMT3Q96AZ1 226 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 USMG5Q96IX5 58 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 NOL4LQ96MY1 436 aaPredicted RBP8.07□□□□□ -1.12
USP3-219ENST00000561326 DUX5Q96PT3 197 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 ATP6V0BQ99437 205 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 RPRMQ9NS64 109 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 C21orf62Q9NYP8 219 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms