RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 GABARAPH6UMI1 98 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 KBTBD11O94819 623 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 YIF1AO95070 293 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 GHRHP01286 108 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 IFNA5P01569 189 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 HLA-DQB1P01920 261 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 PTHLHP12272 177 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 HLA-DMAP28067 261 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 S100GP29377 79 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 CCL18P55774 89 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 TAS2R19P59542 299 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 SSBP1Q04837 148 aaKnown RBP6.76□□□□□ -1.33
HERC1-210ENST00000560897 ZNF846Q147U1 533 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 CFAP161Q6P656 301 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 TCF24Q7RTU0 167 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 HOGA1Q86XE5 327 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 TOMM5Q8N4H5 51 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 UBAC2Q8NBM4 344 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 OR6F1Q8NGZ6 308 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 ZNRF2Q8NHG8 242 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 VN1R17PQ8TDU5 208 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 NIPSNAP3BQ9BS92 247 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 C1QTNF4Q9BXJ3 329 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 WDR12Q9GZL7 423 aaKnown RBP6.76□□□□□ -1.33
HERC1-210ENST00000560897 MIXL1Q9H2W2 232 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 ANXA10Q9UJ72 324 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 KCNK7Q9Y2U2 307 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 DISC1C4P0D8 188 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 J3KRW8 73 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 J3QRK9 145 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 CTDSPLO15194 276 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 FCGR3BO75015 233 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 PMP2P02689 132 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 DUTP33316 252 aaKnown RBP6.75□□□□□ -1.33
HERC1-210ENST00000560897 HERV-K104P61576 105 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 NUTF2P61970 127 aaKnown RBP6.75□□□□□ -1.33
HERC1-210ENST00000560897 DLK1P80370 383 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 RELQ04864 619 aaPredicted RBP6.75□□□□□ -1.33
HERC1-210ENST00000560897 ICAM4Q14773 271 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 KLK9Q2XQG4 91 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 Q56UQ5 140 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 RNASE10Q5GAN6 216 aaKnown RBP6.75□□□□□ -1.33
HERC1-210ENST00000560897 CDPF1Q6NVV7 123 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 MZT2BQ6NZ67 158 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 GSG1LQ6UXU4 331 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 MFSD4AQ8N468 514 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 GDPD1Q8N9F7 314 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 OR5AP2Q8NGF4 316 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 OR52I2Q8NH67 350 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 GPX8Q8TED1 209 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 BORCS5Q969J3 196 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 ABHD1Q96SE0 405 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 MS4A6AQ9H2W1 248 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 MCUBQ9NWR8 336 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 EHFQ9NZC4 300 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 RABAC1Q9UI14 185 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 KLK9Q9UKQ9 250 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 ELF5Q9UKW6 265 aaPredicted RBP6.75□□□□□ -1.33
HERC1-210ENST00000560897 PRELID3BQ9Y3B1 194 aa6.75□□□□□ -1.33
HERC1-210ENST00000560897 IGHV3OR16-13A0A075B7E8 117 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 TRAV14DV4A0A0A6YYC5 116 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 IGHV3-74A0A0B4J1X5 117 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 TRAV2A0A0B4J234 112 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 E7EUB6 86 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 NUPL2O15504 423 aaKnown RBP6.74□□□□□ -1.33
HERC1-210ENST00000560897 ST8SIA3O43173 380 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 SLC22A5O76082 557 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 RAB3DO95716 219 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 FCGR2CP31995 323 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 RPL8P62917 257 aaKnown RBP6.74□□□□□ -1.33
HERC1-210ENST00000560897 MEF2DQ14814 521 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 ACTL10Q5JWF8 245 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 LPCAT3Q6P1A2 487 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 CCDC190Q86UF4 302 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 VKORC1L1Q8N0U8 176 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 CSNK1G2-AS1Q8NCQ2 148 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 DUSP18Q8NEJ0 188 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 SMIM4Q8WVI0 70 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 SCGB3A2Q96PL1 93 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 C21orf62Q9NYP8 219 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 KLK11Q9UBX7 282 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 MTFP1Q9UDX5 166 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 SCP2D1Q9UJQ7 156 aa6.74□□□□□ -1.33
HERC1-210ENST00000560897 LINC00854A0A1B0GVQ3 168 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 KNCNA6PVL3 124 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 LINC00473A8K010 186 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 GSTZ1O43708 216 aaPredicted RBP6.73□□□□□ -1.33
HERC1-210ENST00000560897 SSX5O60225 188 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 EIF4EBP3O60516 100 aaPredicted RBP6.73□□□□□ -1.33
HERC1-210ENST00000560897 AKAIN1P0CW23 69 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 TBPP20226 339 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 ETV6P41212 452 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 PPP5CP53041 499 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 FXYD4P59646 89 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 ODF1Q14990 250 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 SCGB2B2Q4G0G5 96 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 IGSF11Q5DX21 431 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 OR2B11Q5JQS5 317 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 FAM90A2PQ658T7 463 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 STEAP1BQ6NZ63 245 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms