RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 DCTN2Q13561 401 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-213ENST00000560856 GGNBP1Q5YKI7 109 aa11.52□□□□□ -0.57
SNRPA1-213ENST00000560856 PALMDQ9NP74 551 aa11.52□□□□□ -0.57
SNRPA1-213ENST00000560856 TECRQ9NZ01 308 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-213ENST00000560856 MLXQ9UH92 298 aa11.52□□□□□ -0.57
SNRPA1-213ENST00000560856 TMEM50AO95807 157 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 TCRBP04435 133 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 IFITM3Q01628 133 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 LCN12Q6JVE5 192 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 DUSP18Q8NEJ0 188 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 OR1S1Q8NH92 325 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 MARC2Q969Z3 335 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 C20orf85Q9H1P6 137 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 MRPL27Q9P0M9 148 aaKnown RBP11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 SMAD5-AS1Q9Y6J3 95 aa11.51□□□□□ -0.57
SNRPA1-213ENST00000560856 IGHV3OR16-8A0A075B7F1 116 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 MPTX1A8MV57 137 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 K7EMT4 169 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 NUPL2O15504 423 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 ADAP1O75689 374 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 NPBWR1P48145 328 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 ZNF846Q147U1 533 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 OR4X1Q8NH49 305 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 RNASEH2CQ8TDP1 164 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 DYNLRB2Q8TF09 96 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 HIPK2Q9H2X6 1198 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 SELENOKQ9Y6D0 94 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 U3KQ87 197 aa11.5□□□□□ -0.57
SNRPA1-213ENST00000560856 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 FAM90A26D6RGX4 464 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 GNG7O60262 68 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 CLN5O75503 358 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 NPY1RP25929 384 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 OPRK1P41145 380 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 RELQ04864 619 aaPredicted RBP11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 ASAH1Q13510 395 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 TMEM61Q8N0U2 210 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 OR52B4Q8NGK2 314 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 MITD1Q8WV92 249 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 WDR89Q96FK6 387 aaPredicted RBP11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 OR10C1Q96KK4 312 aa11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 WDR12Q9GZL7 423 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 DAZ1Q9NQZ3 744 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-213ENST00000560856 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 UPK1BO75841 260 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 IGKV1-17P01599 117 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 ID3Q02535 119 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 C4orf46Q504U0 113 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 BTNL8Q6UX41 500 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 TOMM20LQ6UXN7 152 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 COQ8AQ8NI60 647 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 NUDT15Q9NV35 164 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 C19orf73Q9NVV2 129 aa11.48□□□□□ -0.57
SNRPA1-213ENST00000560856 TRAV6A0A075B6T7 132 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 A8MZ25 164 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 IFNA10P01566 189 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 ATP5IP56385 69 aaPredicted RBP11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 CD69Q07108 199 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 ZNF600Q6ZNG1 722 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 TMEM116Q8NCL8 245 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 ZFAND3Q9H8U3 227 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 SMPXQ9UHP9 88 aa11.47□□□□□ -0.57
SNRPA1-213ENST00000560856 TRAV25A0A0B4J276 109 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 FAM240BA0A1B0GVZ2 78 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 RPS10-NUDT3A0A1W2PQS6 291 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 SYNGR2O43760 224 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 CD7P09564 240 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 IGLC1P0CG04 106 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 IGHV4-30-4P0DP06 118 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 IAPPP10997 89 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 SLC25A4P12235 298 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 RND2P52198 227 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 OR4D5Q8NGN0 318 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 MAGT1Q9H0U3 335 aa11.46□□□□□ -0.57
SNRPA1-213ENST00000560856 IGHV7-4-1A0A0J9YVY3 117 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 MED6O75586 246 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 YIF1AO95070 293 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 H2AFB2P0C5Z0 115 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 FRMD6-AS1P0C7T7 363 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 GUCA2BQ16661 112 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 TIGITQ495A1 244 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 MZT2BQ6NZ67 158 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 ASCL2Q99929 193 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 SEC22CQ9BRL7 303 aa11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 PUS1Q9Y606 427 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNRPA1-213ENST00000560856 TRAV30A0A087WSZ9 112 aa11.44□□□□□ -0.58
SNRPA1-213ENST00000560856 CHEK1O14757 476 aa11.44□□□□□ -0.58
SNRPA1-213ENST00000560856 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-213ENST00000560856 IFNA21P01568 189 aa11.44□□□□□ -0.58
SNRPA1-213ENST00000560856 SLC16A13Q7RTY0 426 aa11.44□□□□□ -0.58
SNRPA1-213ENST00000560856 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
SNRPA1-213ENST00000560856 ZNF431Q8TF32 576 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-213ENST00000560856 NPIPB3Q92617 1050 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms